Gene Mnod_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3860 
Symbol 
ID7302724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3948522 
End bp3950135 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content71% 
IMG OID643601532 
Productphage portal protein, lambda family 
Protein accessionYP_002499063 
Protein GI220923761 
COG category[R] General function prediction only 
COG ID[COG5511] Bacteriophage capsid protein 
TIGRFAM ID[TIGR01539] phage portal protein, lambda family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.499446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGCG TGTCTCAGGC CCAACCCGTC CGGTTCCGGA TCAAGGGCAC CCACCAGTAC 
GTCACCCCGA TCGCCATGAG CCTGTCCGGC GAGGGAGAGG GCGGCGCGGT GGAGGCGCCG
GCCTACGACG TCGCGGGCGG GCGCGGCCGG CGCTCGCGAT CCTGGCGGGT CGGCAGCTAC
GGCCCGAACA GCGCCATTAC CTACGCGCTC GACGAGCTGC GGCGGAAGTC GCGGGACCAA
GCCCGCAAGA ACCCCTATGC CGGCGCTGCA GTCGACCGGC TGGTCAGCAA CATCGTCGGA
ACCGGCATCG TGCCCCGATC CACGGCGGCG CGGCCGACGG AGGGCTTGAG CGAGGAGGAG
GCGAAGCGGG TCAAGGCGGA GGACGCGGCC TTCCGGACTC GGATCCAGGC CCTCTGGCTG
GAATGGACCG ATGTGGCCGA CAGCGTCGGC GCGCACGACT TCTACGGCCT CACCGCCATT
GCCGTACGCG GCATGGTCGA GGGGGGCGAG ACCTTCACGC GCTTGCGCAC GCGGCTCCTC
ACGGACGGGC TGCCGGTCCC GCTGCAGCTG CAGGTGCTGG AGGGCGATCA CTGCCCGCAC
CTCAAGACCG AAATCGGGAA CCGGATCCGG CAGGGCATCC GCTACGATGC CATCGGGAAG
CGGCAGAGCT ACTTCCTCTA CCGCGAGCAT CCGGGCGACG GCCTCATGGT TGCGTCCGGC
CTGGAGCTCG CCGAGGTGCC GGCGAGCGAC GTGGCCCACC TCTACCGGGC AATGCGGCCC
GGGCAGGACC GCGGCGAACC CTGGCTGGCC CGGGCGCTGC GCACCCTCTA CGACCTCGAT
GCCTACCTCG ACGCCGAGCT GGTGCGGAAG AAGAACGCAG CGCGGCTCGT CGGCTTCATC
AAGCGCGTCA TGGAAGAAGG CGCGGACAGC CCGGTCGGCT CCGGGCCGCT CGGCACGGAT
GGCGCCGACG ACGAGGGCGC CGCCACGTTG GAGTTCGAGC CCGGCACGCT CCAGGTGCTC
GCCGACGGCG AGGACGTCAC CTTCTCGAAC CCGCCGGACG TCGGGCCGAA CTTCGAGATG
TTCGTGCGCG AAGCCAAGCG CGGCGTGGCG GCGGCGTGCG GGCTGCTCTA CGAGCTCCTG
AGCGGCGACT ACAGCACGCT GAACGACCGC ACGCTGCGCG CCGCGCTCAA CGACTTCCGC
CGGGCGGTCG AGGGCTGGCA GCACCATCAG GTGGTGTTTC AGTTCTGCCG GCCGGTGTGG
AACCGCTGGA TGGATCTGGC GGTGCTGTCG GGCGCCCTGA CGATCCCCGC GGGCATGCCG
CGCTCGGTCG CCTATGCGGT GAAGTGGATC CCGCAGGCCT GGCCCTACAT CCACCCCGTG
CAGGACGTCC AGGGCAAGTC CATGGAGGTT CAGGCCGGGT TCTCGTCCCG CTCCCAGAAG
GTGGCCGAGG CCGGCTACGA CGCCGAGGCG ATCGACGCCG AGAACAAGGC CGACAACGAG
CGAGCCGATG CGGAAGGTCT CGCCTACACC AGCGACGGCC GCCGCGCCAC GCAAGCGGCC
GCCGGGGATC CGCCGCCCGA CGACGCTCCC CCCACCCCGG AAGGGCAGTC ATGA
 
Protein sequence
MVSVSQAQPV RFRIKGTHQY VTPIAMSLSG EGEGGAVEAP AYDVAGGRGR RSRSWRVGSY 
GPNSAITYAL DELRRKSRDQ ARKNPYAGAA VDRLVSNIVG TGIVPRSTAA RPTEGLSEEE
AKRVKAEDAA FRTRIQALWL EWTDVADSVG AHDFYGLTAI AVRGMVEGGE TFTRLRTRLL
TDGLPVPLQL QVLEGDHCPH LKTEIGNRIR QGIRYDAIGK RQSYFLYREH PGDGLMVASG
LELAEVPASD VAHLYRAMRP GQDRGEPWLA RALRTLYDLD AYLDAELVRK KNAARLVGFI
KRVMEEGADS PVGSGPLGTD GADDEGAATL EFEPGTLQVL ADGEDVTFSN PPDVGPNFEM
FVREAKRGVA AACGLLYELL SGDYSTLNDR TLRAALNDFR RAVEGWQHHQ VVFQFCRPVW
NRWMDLAVLS GALTIPAGMP RSVAYAVKWI PQAWPYIHPV QDVQGKSMEV QAGFSSRSQK
VAEAGYDAEA IDAENKADNE RADAEGLAYT SDGRRATQAA AGDPPPDDAP PTPEGQS