Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3860 |
Symbol | |
ID | 7302724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 3948522 |
End bp | 3950135 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643601532 |
Product | phage portal protein, lambda family |
Protein accession | YP_002499063 |
Protein GI | 220923761 |
COG category | [R] General function prediction only |
COG ID | [COG5511] Bacteriophage capsid protein |
TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.499446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGTGAGCG TGTCTCAGGC CCAACCCGTC CGGTTCCGGA TCAAGGGCAC CCACCAGTAC GTCACCCCGA TCGCCATGAG CCTGTCCGGC GAGGGAGAGG GCGGCGCGGT GGAGGCGCCG GCCTACGACG TCGCGGGCGG GCGCGGCCGG CGCTCGCGAT CCTGGCGGGT CGGCAGCTAC GGCCCGAACA GCGCCATTAC CTACGCGCTC GACGAGCTGC GGCGGAAGTC GCGGGACCAA GCCCGCAAGA ACCCCTATGC CGGCGCTGCA GTCGACCGGC TGGTCAGCAA CATCGTCGGA ACCGGCATCG TGCCCCGATC CACGGCGGCG CGGCCGACGG AGGGCTTGAG CGAGGAGGAG GCGAAGCGGG TCAAGGCGGA GGACGCGGCC TTCCGGACTC GGATCCAGGC CCTCTGGCTG GAATGGACCG ATGTGGCCGA CAGCGTCGGC GCGCACGACT TCTACGGCCT CACCGCCATT GCCGTACGCG GCATGGTCGA GGGGGGCGAG ACCTTCACGC GCTTGCGCAC GCGGCTCCTC ACGGACGGGC TGCCGGTCCC GCTGCAGCTG CAGGTGCTGG AGGGCGATCA CTGCCCGCAC CTCAAGACCG AAATCGGGAA CCGGATCCGG CAGGGCATCC GCTACGATGC CATCGGGAAG CGGCAGAGCT ACTTCCTCTA CCGCGAGCAT CCGGGCGACG GCCTCATGGT TGCGTCCGGC CTGGAGCTCG CCGAGGTGCC GGCGAGCGAC GTGGCCCACC TCTACCGGGC AATGCGGCCC GGGCAGGACC GCGGCGAACC CTGGCTGGCC CGGGCGCTGC GCACCCTCTA CGACCTCGAT GCCTACCTCG ACGCCGAGCT GGTGCGGAAG AAGAACGCAG CGCGGCTCGT CGGCTTCATC AAGCGCGTCA TGGAAGAAGG CGCGGACAGC CCGGTCGGCT CCGGGCCGCT CGGCACGGAT GGCGCCGACG ACGAGGGCGC CGCCACGTTG GAGTTCGAGC CCGGCACGCT CCAGGTGCTC GCCGACGGCG AGGACGTCAC CTTCTCGAAC CCGCCGGACG TCGGGCCGAA CTTCGAGATG TTCGTGCGCG AAGCCAAGCG CGGCGTGGCG GCGGCGTGCG GGCTGCTCTA CGAGCTCCTG AGCGGCGACT ACAGCACGCT GAACGACCGC ACGCTGCGCG CCGCGCTCAA CGACTTCCGC CGGGCGGTCG AGGGCTGGCA GCACCATCAG GTGGTGTTTC AGTTCTGCCG GCCGGTGTGG AACCGCTGGA TGGATCTGGC GGTGCTGTCG GGCGCCCTGA CGATCCCCGC GGGCATGCCG CGCTCGGTCG CCTATGCGGT GAAGTGGATC CCGCAGGCCT GGCCCTACAT CCACCCCGTG CAGGACGTCC AGGGCAAGTC CATGGAGGTT CAGGCCGGGT TCTCGTCCCG CTCCCAGAAG GTGGCCGAGG CCGGCTACGA CGCCGAGGCG ATCGACGCCG AGAACAAGGC CGACAACGAG CGAGCCGATG CGGAAGGTCT CGCCTACACC AGCGACGGCC GCCGCGCCAC GCAAGCGGCC GCCGGGGATC CGCCGCCCGA CGACGCTCCC CCCACCCCGG AAGGGCAGTC ATGA
|
Protein sequence | MVSVSQAQPV RFRIKGTHQY VTPIAMSLSG EGEGGAVEAP AYDVAGGRGR RSRSWRVGSY GPNSAITYAL DELRRKSRDQ ARKNPYAGAA VDRLVSNIVG TGIVPRSTAA RPTEGLSEEE AKRVKAEDAA FRTRIQALWL EWTDVADSVG AHDFYGLTAI AVRGMVEGGE TFTRLRTRLL TDGLPVPLQL QVLEGDHCPH LKTEIGNRIR QGIRYDAIGK RQSYFLYREH PGDGLMVASG LELAEVPASD VAHLYRAMRP GQDRGEPWLA RALRTLYDLD AYLDAELVRK KNAARLVGFI KRVMEEGADS PVGSGPLGTD GADDEGAATL EFEPGTLQVL ADGEDVTFSN PPDVGPNFEM FVREAKRGVA AACGLLYELL SGDYSTLNDR TLRAALNDFR RAVEGWQHHQ VVFQFCRPVW NRWMDLAVLS GALTIPAGMP RSVAYAVKWI PQAWPYIHPV QDVQGKSMEV QAGFSSRSQK VAEAGYDAEA IDAENKADNE RADAEGLAYT SDGRRATQAA AGDPPPDDAP PTPEGQS
|
| |