Gene Mnod_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3795 
Symbol 
ID7308388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3908129 
End bp3909094 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID643601471 
Producttype II secretion system protein 
Protein accessionYP_002499002 
Protein GI220923700 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGCG CGCTCACGTC CCATTCCGAC CTGCTCGTTG CAGGCATAGC GGCGATCTCC 
GCCTTCTGTG CGTGCATGGT GGTGTCCTGG CCGTATCTGG TCCGCGACCC TCTCGCGTCG
CGCCTGCGTC AGGTCGCGGA CGAGACCGAG GCGATCCGGA TCCGGGAGCG TGCCAAGCTC
CAAGCCGGAC ATGGGCCTTC GCTGCGAACC GAGCCGAAGA AGCTCTTCAA GGACATCTTC
GATCGGCTCA ATCTTGCGCG CCAGGCTGAG GACGGCGCCG TAGTGCAGCG GCTGCGTATG
GCCGGCTATA GGGGACAGGG ACCGGTCGTC ACCTTTCTGG CTGTCCGGCT CATCATGCCC
TTCGTCATGT TTGCCGTGGC CATGTTCTAC GTGTTCGTCG TCCTCCGTCT CGATGGCCCA
TTCGTCCTGA AGCTCGGCAT CGCTTTGGCC GTCGCATACC TGGGCTATTA TGCGCCGGCG
ATCTTCGTGA AGAACCGGAT CAGCAAGCGC CAGACGGCAA TTCGGCGCGC TTGGCCCGAT
GCGCTTGACC TCCTGCTGAT CTGCGTGGAG TCCGGCATGG GTGTGGAGAG CGCCTTCCGA
AAGGTGGCCG ACGAGATCGG GCCGCAATCT CCTGAGCTGG CTGAGGAACT CAGCCTGACC
ACGGCCGAGC TCTCGTATCT GCCGGACCGG CGAAAGGCTT ACGAGAACCT CGCCGAGCGG
ACCGGGCTCG ATGGGGTGAA GGGAGTCGTG ACCAGTCTCA TCCAGGCTGA AAAATACGGA
ACGCCTGTCG GGCAGACCTT GCGCGTGCTT GCACAGGAAA ACCGCGACAT GCGGATGACT
GAAGCAGAGA AGAAGGCGGC CGCATTGCCG CCCAAGCTCA CCGTACCAAT GATCCTGTTC
TTCCTGCCCG TCTTGTTTGC TGTGATCATC ACCCCGGCCG CGATCCAGAT CGCGAACACC
TACTGA
 
Protein sequence
MLSALTSHSD LLVAGIAAIS AFCACMVVSW PYLVRDPLAS RLRQVADETE AIRIRERAKL 
QAGHGPSLRT EPKKLFKDIF DRLNLARQAE DGAVVQRLRM AGYRGQGPVV TFLAVRLIMP
FVMFAVAMFY VFVVLRLDGP FVLKLGIALA VAYLGYYAPA IFVKNRISKR QTAIRRAWPD
ALDLLLICVE SGMGVESAFR KVADEIGPQS PELAEELSLT TAELSYLPDR RKAYENLAER
TGLDGVKGVV TSLIQAEKYG TPVGQTLRVL AQENRDMRMT EAEKKAAALP PKLTVPMILF
FLPVLFAVII TPAAIQIANT Y