Gene Mnod_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3649 
Symbol 
ID7303155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3743122 
End bp3743910 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID643601319 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002498861 
Protein GI220923559 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT CCCTCCCGAC CCGTCTGTTC CTCGGCACGC TCGTCGCGCT GGTGCTGCTG 
TTCCTGGTGG TGCCGGTCCT GATCGTCGTG CCGATGTCGT TCTCGAACGC GCGCTTTCTG
ACCTTCCCGC CGCCCGGCTA TTCCCTGCGC TGGTACGAGG CCTTCTTCGG CAACCCCGCC
TGGATGCAGG CGGCGCGGGT GAGCCTCGGG GTGGCGGTCG CGACCGCCAT CGGCGCGACG
CTGATCGGCA CGGCGGCCGC CTATGCGCTC GCCATGAGCG GCGCGCGCCT CGCCCGCAGC
CTCACGGTCC TGCTGCTCCT GCCCCTGATC GTGCCGATCG TGATCACGGC GATCGGCGTG
TTCTTCGTCT TCGCCAAGAC CGGGCTGCTT GCGACCATGC CGGGGCTCGT GCTCGCCAAC
ATCATGCTGG GCACGCCCTA CGTGGTGACC TCGGTGCTGG CGGGCCTGCG CGGCTTCGAC
CCGGCGCAGG AGATGGTGGC GCGCAGCCTC GGCATGAACC GCCTGCGGGC CTTCCTGACC
GTGACCCTGC CGCAGATCCG CCCGAGCGTG GTCTCGGGCG CGCTCTTCGC CTTCATCTCG
GCCCTCGACG AGACCGTGGT GGCGATCTTC ATCTCCGGCG GGCCGAACCA GACGCTGACG
AAGCGCATGT TCACGTCCCT GCGCGACGAG ATCGATCCGA CCATCGCGGC GATCTCGTCG
CTTCTGACCG CGGCCTCGCT CATCGTGGTG ATCCTGGCGA GCCTCGGCGC CCGACGCGGC
CGGGCCTGA
 
Protein sequence
MTASLPTRLF LGTLVALVLL FLVVPVLIVV PMSFSNARFL TFPPPGYSLR WYEAFFGNPA 
WMQAARVSLG VAVATAIGAT LIGTAAAYAL AMSGARLARS LTVLLLLPLI VPIVITAIGV
FFVFAKTGLL ATMPGLVLAN IMLGTPYVVT SVLAGLRGFD PAQEMVARSL GMNRLRAFLT
VTLPQIRPSV VSGALFAFIS ALDETVVAIF ISGGPNQTLT KRMFTSLRDE IDPTIAAISS
LLTAASLIVV ILASLGARRG RA