| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3414 |
|---|
| Symbol | |
|---|
| ID | 7308779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 3533083 |
|---|
| End bp | 3533943 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643601089 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002498633 |
|---|
| Protein GI | 220923331 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGT CTCGTCCGGA TCTCTCCCGC TTCGCCATCA ACCAGATCAC GACCCGCGAC
TGGACGCTCG CGCAGGCCGT CGACGGCTAT GCCAGAGCCG GTGTGCGAGG CATCGGGGCC
TGGGTCCAGT ACGTGGACGA TGCCGGCACC GCGGCCGCCG CGCGGCTGAT CCGTGAGGCA
GGGCTCTTCG TGCCCTGCCT GTGCACGACG GCCTGGGTGA ACCTCGCCGA CTCCACCGCC
TACCGGGCCG CTCTCGCGGA GAACCGTCGC CGGCTCGACA TGGCGGCGGA GATCGGCGCG
AAGACCCTCG TCGTTGTTCC GGGAGGCCTC GCCACGGGCG AGCGCGACCT CGCAGCCGCG
CGCCGCCGCG TGGCGGAGGC GCTGGCCGAG CTTCTGCCCT ATGCACGCTC GGTCGGCGTG
GCGCTCGGGC TGGAGCCGCT GCATCCCATG TACGCGGCGG ACCGCTCGTG CCTTTCGACC
TTCGCGCATT GCCTCGATCT CTGCGAGCTG CTGGGCACCG GGGCCGGTAT CGTGGCCGAC
GTCTATCATT GCTGGTGGGA TCCGAACTTC ATCGCAGGCT TGGAGAAGGC CGGACCGGAC
CGTATCCTGA CCTTCCACCT CTGCGACTGG CTCGTCCCGA CGCGGGACGT CTATCAGGAC
CGTGGCATGG TGGGCGACGG CGTCATCGAC ATCGCCGGCT ACCGGGCGGT GCTCGATCGG
ATCGGCTACG ATGGCCCGTT CGAGATTGAG ATCTTCTCGA AACTCGATTG GTGGCTGCGC
GACGGCGCGG AGACGACGCG GATTGCCGTC GAGCGCTGCG CGCCTTTCGT TTCCCCGCGG
CCCCAGGCTA AAGCGGCGTG A
|
|---|
| Protein sequence | MSTSRPDLSR FAINQITTRD WTLAQAVDGY ARAGVRGIGA WVQYVDDAGT AAAARLIREA
GLFVPCLCTT AWVNLADSTA YRAALAENRR RLDMAAEIGA KTLVVVPGGL ATGERDLAAA
RRRVAEALAE LLPYARSVGV ALGLEPLHPM YAADRSCLST FAHCLDLCEL LGTGAGIVAD
VYHCWWDPNF IAGLEKAGPD RILTFHLCDW LVPTRDVYQD RGMVGDGVID IAGYRAVLDR
IGYDGPFEIE IFSKLDWWLR DGAETTRIAV ERCAPFVSPR PQAKAA
|
|---|
| |