Gene Mnod_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3360 
Symbol 
ID7308726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3473697 
End bp3475772 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content67% 
IMG OID643601041 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002498585 
Protein GI220923283 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACCT CGACATCTCC CGTCCAGGTC CACCGCCACG GGACGGTGGC GGTGATCACC 
ATCGATCACC CTCCGGTGAA TGCCCTGTCG CAGGCGGTGC GGCAGGGCCT CCTCGCTGCC
GTGCGCAAGC TCGATGCCGA TTCCTCTGTT ACGGCATTGG TGATCACTGG CGTTGAGGGC
CGCTTCATCG CGGGTGCCGA CATCCGCGAG ATGAACCAGC CTCCGGGCGA GCCGCTCCTG
CCCGACGTCG TCGCGGCGAT CGATGCTTGT ACCAAGCCGC TGATCGCGGC CATCGGCGGC
CCGGCTCTGG GCGCGGGCTT AGAGATCGCG CTCGCTTGCG ATGCGCGTCT CGGTGGACCC
GCGGCGCAAC TCGGCCTGAC CGAAATCAGG CTCGGTCTCA TCCCGGGAGC GGGGGGGACG
CAGCGCTTGC CGCGCCTCGT CGGCGTGGCC CGGGCGGTGT CGCTCATTGG CGAAGGTCGC
GTGCTGAAGG CGCCGGAGGC CCACGACCTT GGTCTGTTGG ACGAGGTGGT GACGGGAGAC
CTCCTGGTCG CTGCCCTCGA ACGAGCGCCG CACGTGGCCA AACGCCGCGT CTCGGAGCTT
CCCGTTCCGC GGGGTGATGC GGCCGCGGAG GCGCTGGCCT TCTCCCGCGC ACGGAAAGCG
GCGAAGAGTG TTCCGGCGAT CGAGGCCGCG ATCCGGGTGA TCAGCGCCGC GCATGAAGGC
GATTTCGCCT CCGGCCTTGC TCAAGAGCGC GCTGCCTTTC TTGCCTTGCG AGGGAGCTCG
GAAGCGCGCG CTCTGCGCCA TCTCTTCTTC GCCGAGCGCG AGGCCGGCAA AGTCCCAGGA
ATGGCGGAGG CGGTTGCGCG TCACGTGGCC ATGGTCGCGG TGATCGGCGC CGGGACGATG
GGCGCGGGCA TCGCGGTCGC CCTCGCCGAC GCCGGTCTGC CTGTGATGCT GGTCGAGCGC
GACGACACGG CGGCTTCGGC CGGGCTCAGC CGGGTTCGCG ACCTCTACGA GCGACAGGTG
AAGAGTGGTC GCATTTCGGA AGCGGATGTG GCGGAAAGAC TCGGTCGCAT CCTTCCAACG
TCGGATTGGA GCTGTCTTGC CGCTGCCGAC CTCATCGTCG AGGCCGCCTT CGAGGACATG
GCAGTGAAGG CGGATATTTT TCGCCGCCTC GACGCTGTCG CGAAGAGCGG CGCGGTGCTC
GCCACGAACA CCTCCTACTT GGACCTCGAC GCGATCGCGG CTGCCACTTG CCGCCCGCAG
GACGTGGTGG GGCTGCATTT CTTTGCTCCC GCCCATGTCA TGAAGCTCCT CGAGGTGGTG
CGTGGCAGGG CCACTGCACC CGAGGTGATC GCCACCGCAC TCACCCTCGC GAGGAGGGCA
GGCAAGCAGC CCGTGGTGGC TGGGAATTGC GACGGCTTCA TCGGGAACCG CATCTATGCA
GCCTATCGGC GCCATGCGGA GTACCTTGTC GAAGACGGGG CGGCTCCCGA TGCCGTCGAT
GCAGCGCTCG AGGCCTACGG CTTTGCCATG GGCATCTTCA CCGTGTCCGA TATGTCCGGC
CTCGACATCG CCTTCGCCAT GAGGAAGCGC CGAGCTGCGA CCCGTGACTC TCGCGAGCGT
TACGTCGCGA TCCCGGACCG CCTGTGTGAG CTCCAGCGCC TCGGGCGGAA GACGAATGCA
GGGTGGTACG CCTATGATGC AGCGGGACGG AAATCCGTCG ATCCGTTGGT CACGCAGCTG
ATCGCTGCGG CGCGTGCGGA GAAGGGCATC GTTCCCCGTA CCTTCACGGC TTTGGAGATC
CAGAACCGCC TTCTTGCGGT CATGGCCAAT GAGGGTGCGA AAGCCCTCGC GGAGGGTGTC
GCGCTGCGCG CCTCCGACAT CGATGTCGTG TTCGTCAATG GCTACGGCTT CCCACGCACC
AAGGGCGGAC CGATGTGGGC TGCCGACCAG ATGGGACTGC CGCGCGTCCT CGCAGAGATG
AAAGCGGCTC AGGAGGCGGG TGGCTCTGGC TCGGAGCCTG CGCCCCTCCT CGTCGAGCTG
GCGCGCACAG GTCGCAGCTT CGCCGACTGG CACTAG
 
Protein sequence
MSTSTSPVQV HRHGTVAVIT IDHPPVNALS QAVRQGLLAA VRKLDADSSV TALVITGVEG 
RFIAGADIRE MNQPPGEPLL PDVVAAIDAC TKPLIAAIGG PALGAGLEIA LACDARLGGP
AAQLGLTEIR LGLIPGAGGT QRLPRLVGVA RAVSLIGEGR VLKAPEAHDL GLLDEVVTGD
LLVAALERAP HVAKRRVSEL PVPRGDAAAE ALAFSRARKA AKSVPAIEAA IRVISAAHEG
DFASGLAQER AAFLALRGSS EARALRHLFF AEREAGKVPG MAEAVARHVA MVAVIGAGTM
GAGIAVALAD AGLPVMLVER DDTAASAGLS RVRDLYERQV KSGRISEADV AERLGRILPT
SDWSCLAAAD LIVEAAFEDM AVKADIFRRL DAVAKSGAVL ATNTSYLDLD AIAAATCRPQ
DVVGLHFFAP AHVMKLLEVV RGRATAPEVI ATALTLARRA GKQPVVAGNC DGFIGNRIYA
AYRRHAEYLV EDGAAPDAVD AALEAYGFAM GIFTVSDMSG LDIAFAMRKR RAATRDSRER
YVAIPDRLCE LQRLGRKTNA GWYAYDAAGR KSVDPLVTQL IAAARAEKGI VPRTFTALEI
QNRLLAVMAN EGAKALAEGV ALRASDIDVV FVNGYGFPRT KGGPMWAADQ MGLPRVLAEM
KAAQEAGGSG SEPAPLLVEL ARTGRSFADW H