Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3360 |
Symbol | |
ID | 7308726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3473697 |
End bp | 3475772 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643601041 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_002498585 |
Protein GI | 220923283 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTACCT CGACATCTCC CGTCCAGGTC CACCGCCACG GGACGGTGGC GGTGATCACC ATCGATCACC CTCCGGTGAA TGCCCTGTCG CAGGCGGTGC GGCAGGGCCT CCTCGCTGCC GTGCGCAAGC TCGATGCCGA TTCCTCTGTT ACGGCATTGG TGATCACTGG CGTTGAGGGC CGCTTCATCG CGGGTGCCGA CATCCGCGAG ATGAACCAGC CTCCGGGCGA GCCGCTCCTG CCCGACGTCG TCGCGGCGAT CGATGCTTGT ACCAAGCCGC TGATCGCGGC CATCGGCGGC CCGGCTCTGG GCGCGGGCTT AGAGATCGCG CTCGCTTGCG ATGCGCGTCT CGGTGGACCC GCGGCGCAAC TCGGCCTGAC CGAAATCAGG CTCGGTCTCA TCCCGGGAGC GGGGGGGACG CAGCGCTTGC CGCGCCTCGT CGGCGTGGCC CGGGCGGTGT CGCTCATTGG CGAAGGTCGC GTGCTGAAGG CGCCGGAGGC CCACGACCTT GGTCTGTTGG ACGAGGTGGT GACGGGAGAC CTCCTGGTCG CTGCCCTCGA ACGAGCGCCG CACGTGGCCA AACGCCGCGT CTCGGAGCTT CCCGTTCCGC GGGGTGATGC GGCCGCGGAG GCGCTGGCCT TCTCCCGCGC ACGGAAAGCG GCGAAGAGTG TTCCGGCGAT CGAGGCCGCG ATCCGGGTGA TCAGCGCCGC GCATGAAGGC GATTTCGCCT CCGGCCTTGC TCAAGAGCGC GCTGCCTTTC TTGCCTTGCG AGGGAGCTCG GAAGCGCGCG CTCTGCGCCA TCTCTTCTTC GCCGAGCGCG AGGCCGGCAA AGTCCCAGGA ATGGCGGAGG CGGTTGCGCG TCACGTGGCC ATGGTCGCGG TGATCGGCGC CGGGACGATG GGCGCGGGCA TCGCGGTCGC CCTCGCCGAC GCCGGTCTGC CTGTGATGCT GGTCGAGCGC GACGACACGG CGGCTTCGGC CGGGCTCAGC CGGGTTCGCG ACCTCTACGA GCGACAGGTG AAGAGTGGTC GCATTTCGGA AGCGGATGTG GCGGAAAGAC TCGGTCGCAT CCTTCCAACG TCGGATTGGA GCTGTCTTGC CGCTGCCGAC CTCATCGTCG AGGCCGCCTT CGAGGACATG GCAGTGAAGG CGGATATTTT TCGCCGCCTC GACGCTGTCG CGAAGAGCGG CGCGGTGCTC GCCACGAACA CCTCCTACTT GGACCTCGAC GCGATCGCGG CTGCCACTTG CCGCCCGCAG GACGTGGTGG GGCTGCATTT CTTTGCTCCC GCCCATGTCA TGAAGCTCCT CGAGGTGGTG CGTGGCAGGG CCACTGCACC CGAGGTGATC GCCACCGCAC TCACCCTCGC GAGGAGGGCA GGCAAGCAGC CCGTGGTGGC TGGGAATTGC GACGGCTTCA TCGGGAACCG CATCTATGCA GCCTATCGGC GCCATGCGGA GTACCTTGTC GAAGACGGGG CGGCTCCCGA TGCCGTCGAT GCAGCGCTCG AGGCCTACGG CTTTGCCATG GGCATCTTCA CCGTGTCCGA TATGTCCGGC CTCGACATCG CCTTCGCCAT GAGGAAGCGC CGAGCTGCGA CCCGTGACTC TCGCGAGCGT TACGTCGCGA TCCCGGACCG CCTGTGTGAG CTCCAGCGCC TCGGGCGGAA GACGAATGCA GGGTGGTACG CCTATGATGC AGCGGGACGG AAATCCGTCG ATCCGTTGGT CACGCAGCTG ATCGCTGCGG CGCGTGCGGA GAAGGGCATC GTTCCCCGTA CCTTCACGGC TTTGGAGATC CAGAACCGCC TTCTTGCGGT CATGGCCAAT GAGGGTGCGA AAGCCCTCGC GGAGGGTGTC GCGCTGCGCG CCTCCGACAT CGATGTCGTG TTCGTCAATG GCTACGGCTT CCCACGCACC AAGGGCGGAC CGATGTGGGC TGCCGACCAG ATGGGACTGC CGCGCGTCCT CGCAGAGATG AAAGCGGCTC AGGAGGCGGG TGGCTCTGGC TCGGAGCCTG CGCCCCTCCT CGTCGAGCTG GCGCGCACAG GTCGCAGCTT CGCCGACTGG CACTAG
|
Protein sequence | MSTSTSPVQV HRHGTVAVIT IDHPPVNALS QAVRQGLLAA VRKLDADSSV TALVITGVEG RFIAGADIRE MNQPPGEPLL PDVVAAIDAC TKPLIAAIGG PALGAGLEIA LACDARLGGP AAQLGLTEIR LGLIPGAGGT QRLPRLVGVA RAVSLIGEGR VLKAPEAHDL GLLDEVVTGD LLVAALERAP HVAKRRVSEL PVPRGDAAAE ALAFSRARKA AKSVPAIEAA IRVISAAHEG DFASGLAQER AAFLALRGSS EARALRHLFF AEREAGKVPG MAEAVARHVA MVAVIGAGTM GAGIAVALAD AGLPVMLVER DDTAASAGLS RVRDLYERQV KSGRISEADV AERLGRILPT SDWSCLAAAD LIVEAAFEDM AVKADIFRRL DAVAKSGAVL ATNTSYLDLD AIAAATCRPQ DVVGLHFFAP AHVMKLLEVV RGRATAPEVI ATALTLARRA GKQPVVAGNC DGFIGNRIYA AYRRHAEYLV EDGAAPDAVD AALEAYGFAM GIFTVSDMSG LDIAFAMRKR RAATRDSRER YVAIPDRLCE LQRLGRKTNA GWYAYDAAGR KSVDPLVTQL IAAARAEKGI VPRTFTALEI QNRLLAVMAN EGAKALAEGV ALRASDIDVV FVNGYGFPRT KGGPMWAADQ MGLPRVLAEM KAAQEAGGSG SEPAPLLVEL ARTGRSFADW H
|
| |