Gene Mnod_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3062 
Symbol 
ID7303989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3162723 
End bp3163334 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID643600761 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002498306 
Protein GI220923004 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.58769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTT TCACTGTTGT CGCCGGCCCG GCCGCGCCCC TGCCGGCCGC CAACGTCGAT 
ACCGACGTCA TCATGCCCAA GCAGTTCCTG AAGGGCATCG ACCGCAGCGG TCTCGCACAG
GGGGTACTCC ACGACCTGCG CTTCGACAAG GACGGCGTCC CCCGTCCCGA CTTCGTGCTC
AACCGTCCGG AGTGGCAGAA CGCGCGCTTC CTCGTGGTCG GCCCGAACTT CGGCTGCGGC
TCCTCGCGCG AGCACGCGGT GTGGGGCCTG CTGCAACTCG GCATCCGTGC CATTATCGGC
ACGACCTTCG CGGGCATCTT CGCTGACAAC GCTGCCAACA ATGGGCTTCT CCTGGTCACG
CTCGATCCCG AGCAGGCGAG CGTCCTGTCC GCGCTGGCTG CAAAGCCGGA CGGCAACCGC
TTCGCCGTCG ATCTGCCGGA ACAGACTATC GCTGCCGGTG ACGCGGTGCG CCTGGGCTTT
GAGATACCAC CCACTCGAAA GGACGCTCTA GTTCGGGGGC TCGATGCGAT CGGAATGACG
CTCGATCAGG CCGCGGCGAT CCGAGCCTTC GAGGCGCGGT ACCACGCTGC CCATCCCTGG
CTTGTCCGGT GA
 
Protein sequence
MQPFTVVAGP AAPLPAANVD TDVIMPKQFL KGIDRSGLAQ GVLHDLRFDK DGVPRPDFVL 
NRPEWQNARF LVVGPNFGCG SSREHAVWGL LQLGIRAIIG TTFAGIFADN AANNGLLLVT
LDPEQASVLS ALAAKPDGNR FAVDLPEQTI AAGDAVRLGF EIPPTRKDAL VRGLDAIGMT
LDQAAAIRAF EARYHAAHPW LVR