| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2867 |
|---|
| Symbol | nirA |
|---|
| ID | 7303958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 2951338 |
|---|
| End bp | 2953125 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643600575 |
|---|
| Product | ferredoxin-nitrite reductase |
|---|
| Protein accession | YP_002498121 |
|---|
| Protein GI | 220922819 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.483456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ACTTCGACGC CGAGCAGAAG CGTTATCTCG AAGGGTTCGC CCACGGCATC
ACCGCCGTCC GGATGACGGG CGGGCTCGGA ACCGGCGGCG CGGCCCCGGC CCCGGCCCCC
GAGCCGACCG GACCCGACGC CCCCCACATC AAGGCCCAGG ACAAGCTCGT GAAGGCCGGG
GCGAAGCTCT CCGATCAGGA GAAGTGGAAG CGCGCCGAGA ATCCCTTCGA CGGGCACAAC
CGCCTGATCG CCGAGGCCGA GGCCGGCAAG ACGCCCAAGC CCGAGGATAA TTTCCGCTGG
CGCTATCACG GCCTGTTCTG GGTCGCACCG GCCCAGACCT CCTACATGTG CCGGCTGCGG
ATCCCGAACG GCATCCTGCA GCACTGGCAG TTCGCCGGCA TCGCCGACCT CGCGGACGCG
CATGGCGGCG GCTATGCCCA CGTGACGACG CGGGCGAACC TGCAGGTGCG CGAGATCGCG
CCCGAGCACG GCCAGCCCTT CCTCGACGGG CTGGTGGATC TCGGCCTCAC CGCCCGCGGG
GCCGGGGCGG ACAACATCCG CAACGTCACC GGCTCGCCGA CGGCGGGCAT CGACGCCCAG
GAACTCCTCG ACACGCGGCC GCTCGCCAGG TCCTGGCACA ACTGGATCCT CAACGACCGC
TCGCTCTACG GCCTGCCGCG CAAGTTCAAC GTCGCGTTCG ACGGCGGCGG CGTGCTCCCG
GTCCTGGAGG AGACGAACGA CATCGGCTTC CAGGCGGTCG AGGTGACGGA GGGAGCCTCT
GTCGAGCCGG GCATCTGGAT GCGCCTCGTG CTCGGCGGCA TCACCGGGCA CCGCGACATC
GCCCGCGACA CCGGCGTGGT GCTGCGCCCG AAAGAGTGCA ACGCCGTCGC CGACGCGATC
CTGCGCGTCT TCATCGAGAA CGGCGACCGC ACCAACCGCA ACAAGGCGCG GATGAAGTAC
GTCCTCGACG CCTGGGGCTT CGACAAGTAC CTCGCCGCCG TCGAGGAGAA GCTCGGCCGC
AAGCTGGAGC GGGTGGATCC GGCCCACATC AAGCCCCGCG GCGGCTTCGA CCGCTACGCC
CATGTGGGCG TCCATCGCCA GAAGCAGGCC GGGCTGAACT GGATCGGCGT CGTCCTGCCG
GTCGGCAAGA TGACCACCGA CCAGATGCGG GCGCTCGCCG CCATCGCCCG GGAGTGCGGC
GACGGCCTGA TCCGCCTCAC GGTCTGGCAG AACTTCCTGT TCTCCGGCGT GCCGGACGCT
CACGTGGCGG AGGTGGAGGC GCGGGTGGCG GCACTCGGGC TCACCACCCG GGCGTCGAGC
ATCCGGGCCG GTCTCGTCGC CTGCACGGGC AACCGCGGCT GCAAGTTCGC GGCCTCCGAC
ACCAAGGGCC ACGCCCTGAT GATCGCCGAC TACATCGAGG CCCGGGTGAA GGAGCTCGAC
GTGCCGGTGA ACCTCCACCT CACCGGCTGC CATCATTCCT GCGCCCAGCA CTACATCGGC
GATATCGGCC TGATCGGCGC CAAGGTGGTG GTCAGCGAGG AGGGCGACAC CGTCGAGGGC
TACGACATCG TGGTCGGCGG CGGCTTCGGT GAGGCGGCCA GGATCGGCAC CGAGATCTGG
AAGGCCGTGA GGGCCGAGGA TTGCCCGGGC CGGGTGGAGC TGCTGCTGCG CGACTACCTC
GCCCACCGCA CCGGACCCCA GGAGAGCTTC CAGGCCTTCA CTTCCCGCCG TGGGCCGGAA
GCCCTGAAGG AACTCGCCGA GAGCCGGATG CTGGAGGCCG CGGAATGA
|
|---|
| Protein sequence | MADDFDAEQK RYLEGFAHGI TAVRMTGGLG TGGAAPAPAP EPTGPDAPHI KAQDKLVKAG
AKLSDQEKWK RAENPFDGHN RLIAEAEAGK TPKPEDNFRW RYHGLFWVAP AQTSYMCRLR
IPNGILQHWQ FAGIADLADA HGGGYAHVTT RANLQVREIA PEHGQPFLDG LVDLGLTARG
AGADNIRNVT GSPTAGIDAQ ELLDTRPLAR SWHNWILNDR SLYGLPRKFN VAFDGGGVLP
VLEETNDIGF QAVEVTEGAS VEPGIWMRLV LGGITGHRDI ARDTGVVLRP KECNAVADAI
LRVFIENGDR TNRNKARMKY VLDAWGFDKY LAAVEEKLGR KLERVDPAHI KPRGGFDRYA
HVGVHRQKQA GLNWIGVVLP VGKMTTDQMR ALAAIARECG DGLIRLTVWQ NFLFSGVPDA
HVAEVEARVA ALGLTTRASS IRAGLVACTG NRGCKFAASD TKGHALMIAD YIEARVKELD
VPVNLHLTGC HHSCAQHYIG DIGLIGAKVV VSEEGDTVEG YDIVVGGGFG EAARIGTEIW
KAVRAEDCPG RVELLLRDYL AHRTGPQESF QAFTSRRGPE ALKELAESRM LEAAE
|
|---|
| |