Gene Mnod_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2260 
Symbol 
ID7306805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2361331 
End bp2361927 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID643599995 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002497543 
Protein GI220922241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGGC TCGACAGACT GGAATCGCCG GCGCTTCCCG TCGCGATCGT CAACTGCGAC 
ACCGACCAGA TCCTGCCGGC GCAGTACCTG CAGAAGCTGC GGTCGGAGAA TTTCGGGCCG
TTCCTGTTCC GGCAGCTTCG CTTCCGCGAC GACGGATCGG AGGTGGAGGA CTTCGTCCTG
AACCGGGCTC CCTACCGCGC AGCTCGAGTC CTCGTGGCCG ACCGCAACTT CGCCTGCGGC
TCGTCCCGCG AGCACGCCGT CTGGGCGCTC TACGATTACG GATTCCGTGT CGTGATCGCG
CCGAGCTTCG GCGACATCTT CTTCGCCAAC AGCCTGAAGA ACGGCCTCCT GCCGATCGTG
CTGCCCCAGC AGGTCGTGTC GGCGGAGCTG GAGGCGCTCG CCCGCAACCC GGGCGCGATG
ATCGCGGTCG ACTTGCCCGA GCAGACGGTC CGGCTTTCCG GGGGCGCGAT CCACAGCTTC
GAGGTCAATG CCTTCGCCAA GCGGTGCCTG CTGAGCGGCC TCGACGAGCT CGGCTATACG
TTGGCCCATT CGGACGAGAT CGACGCCTTC GAGGCGCGTT ACGAGAGCGG GCGCTGA
 
Protein sequence
MERLDRLESP ALPVAIVNCD TDQILPAQYL QKLRSENFGP FLFRQLRFRD DGSEVEDFVL 
NRAPYRAARV LVADRNFACG SSREHAVWAL YDYGFRVVIA PSFGDIFFAN SLKNGLLPIV
LPQQVVSAEL EALARNPGAM IAVDLPEQTV RLSGGAIHSF EVNAFAKRCL LSGLDELGYT
LAHSDEIDAF EARYESGR