Gene Mnod_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2088 
Symbol 
ID7305022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2186429 
End bp2187250 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID643599821 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002497376 
Protein GI220922075 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCG GGCTGCTGCG ACGGGTGCTG GATCTGGTGG AGCTGCTCGC CGGCCATGCG 
CGCGGGCTGC CGCTCCAGAC CATCGCCGAC TCGCTCGACA TCCCGAAGAG CGGCGCTCAC
CGCCTGCTCG CGGAACTCGT CTCCTATGAA TACGTCAGGC AGGATCCGGA TAGCGGCCGC
TATCTCCTGA CCACCAAGTT CGCGACGCTC GGGCTCAAGC ATCTGGCGAA TTCGGGCGTG
GTGGACGTGT CGCAATCGGT GCTGAACCGC CTCGCCGAGC AGAGCGGCGA GCTCGTGCGC
CTGGCAGTGG TCGATTATCC GCGCCTCGTC TGGGTGGCGA AGGCGCAGGG CGCACGCTCG
GGGCTGCGAT ACGACGCGGA TATGGGCACG GAGGCGAGCC TCTCGACCTC CTCCACCGGC
ATCGTGTGGC TCGCCAGTCT CTCCGACGAG GAGGCGGTGG AACTCGTCCT GCGCCAGGGC
TTCCGGCCGC CCGGGACCGC GGGACCGAAT GCGCCGCGCA CAATCCCGGC CCTCCTCGCC
CTCGTCGCGG AGGCCCGCGC CCGGGGCTAT GCCTGGGTGC ACGAGACCCA TGCCGCCGGC
ACCGCCGCGA TGGCGGCGAA CATCATCCAT CCGACGACGG GTCACGCGAT CGGCAATGTC
AGCATCGCGG GGCCGAGCGC CCGCCTGACG GAAGCCGAGC GGGACCGGCT GGCGCCCGAC
CTCATGGACG CCGCCGCGAC CCTCTCGGCG GTCGGGCCGC TCTCCGACTA TCTCGCGGCC
TTAAGCGGAC GGCGCGCGCG CGACGAGGTG CGCTCGGCGT GA
 
Protein sequence
MAAGLLRRVL DLVELLAGHA RGLPLQTIAD SLDIPKSGAH RLLAELVSYE YVRQDPDSGR 
YLLTTKFATL GLKHLANSGV VDVSQSVLNR LAEQSGELVR LAVVDYPRLV WVAKAQGARS
GLRYDADMGT EASLSTSSTG IVWLASLSDE EAVELVLRQG FRPPGTAGPN APRTIPALLA
LVAEARARGY AWVHETHAAG TAAMAANIIH PTTGHAIGNV SIAGPSARLT EAERDRLAPD
LMDAAATLSA VGPLSDYLAA LSGRRARDEV RSA