Gene Mnod_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1885 
Symbol 
ID7305915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1988040 
End bp1989092 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content72% 
IMG OID643599619 
ProducttRNA synthetase class II (D K and N) 
Protein accessionYP_002497177 
Protein GI220921876 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.70209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCG TCTCCCCCTG GTGGACTCCC CATGTCCACG CTGACCGTCG CCCCCGCCTT 
CTTGCCCGCA ACCGCATCAA GGCGGCCCTG CGGTCCTGGT TTTCCGATCG CGGCTTCGTC
GAGGTCGACA CCGCCGCCCT CCAGGTCTCG CCCGGCAACG AGGCGCATCT TTCCGCCTTC
GCCACCCGGG CGATCGGGCC GGACGGGCGG GGCATGCCGC TCTATCTCCA CACCTCGCCC
GAATTCGCCT GCAAGAAGCT TCTCGCCGCG GGCGAGCGGC GGCTCGTGAG CTTCGCGCCC
GTCTACCGCA ACCGGGAGCG CGGCCCGCTG CACCATCCGG AATTCACGCT CCTCGAATGG
TACCGGGTGG GCGAACCCTA CGGCGTGCTG ATGCGCGACT GCGCAGCGCT CCTCGCGCTC
GCGGCCGAGA CGGCCGGCAC GGACAGGTTC CGGTTTCGGG ACCGCGAGGC CGACGCCCTC
GCCGAGCCCG AGCGGCTCAC CGTCGCGGAG GCCTTCTGGC GCTTTTCCGG CATCGACCTC
CTCGCCACCG TGGCGGCGGA CGGCACCACC GACCGGGCGG CTTTCCAGGC GGCGGTCGCG
GGCGCCGGCA TCCGCACCGC TCCCGACGAT ACCTGGGCCG ACCTGTTCAG CCGCGTCCTC
GTCGAGCGCA TCGAGCCGGA GCTCGGGCAG GGCCGGGCGA CGATCCTGTG CGAGTACCCG
ATTCCCGAGG CGGCCCTCGC CCGCCCGAGC CCGCACGACC CGCGGGTGGC CGAGCGGTTC
GAGCTCTATT GTTGCGGGGT CGAGCTCGCC AACGCCTTCG GCGAACTCAC GGATGCGGAC
GAGCAGCGCC GCCGCTTCAT GGCCGAGATG GACGAGAAGG AGCGCATCTA CGGGGAGCGC
TACCCGCTCG ACGAGGATTT CCTGGCGGCG CTGGCCCGGA TGCCCGAGGC GAGCGGCATC
GCCCTCGGCT TCGACCGGCT CGTCATGCTG GCGACGGGCG CCCGCCGGAT CGAGGAGGTG
ATCTGGACCC CCGTCGCGGA GGCGCCGCGG TGA
 
Protein sequence
MTSVSPWWTP HVHADRRPRL LARNRIKAAL RSWFSDRGFV EVDTAALQVS PGNEAHLSAF 
ATRAIGPDGR GMPLYLHTSP EFACKKLLAA GERRLVSFAP VYRNRERGPL HHPEFTLLEW
YRVGEPYGVL MRDCAALLAL AAETAGTDRF RFRDREADAL AEPERLTVAE AFWRFSGIDL
LATVAADGTT DRAAFQAAVA GAGIRTAPDD TWADLFSRVL VERIEPELGQ GRATILCEYP
IPEAALARPS PHDPRVAERF ELYCCGVELA NAFGELTDAD EQRRRFMAEM DEKERIYGER
YPLDEDFLAA LARMPEASGI ALGFDRLVML ATGARRIEEV IWTPVAEAPR