Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1452 |
Symbol | |
ID | 7301309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1533056 |
End bp | 1533733 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643599187 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_002496747 |
Protein GI | 220921446 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0186268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCTTGC TCCCTCCTCT TGACGGCGCC CGCGCCGTGG TCTTCGACGC CTATGGCACC CTCCTCGACG TGCACTCTGC CGTGCAACGT CACGCCGCCG CGGTCGGGCC CGACGCCCGG TCCCTGTCGG ACACCTGGCG CCAGAAACAG CTTGAATACT CCTGGGTGCT CTCGCTGTGC GGCCGGTACG CCCCGTTCTG GGCGTTGACC GAGCGTGCGC TCGACTACGC GCTCGCCCGC CATCCCGGCG TCGACCGGGG AGTGCGATCG GCGCTCCTGG AGGCGTACCG GGTGCTGGAC GCCTACGCGG AGGTGCCCCG CACCCTCGCG GCGCTGCGCG CGGCCGGCCT TAGGACCGCG ATCCTATCCA ACGGCGACGC CGCAATGCTC GACGCCGCGC TACGGGCCGC TGCGCTCCAG GATCACCTGG ACGCGGTGCT GTCGGTCGAC CCGGCTGGCG TCTTCAAGAC CAGCCCCCGC GCCTACGACC TCGTGCCAGA GCGGCTGGGT GTCGGCGTGT CCGAGACCGC GTTCGTGTCC TCGAACCGCT GGGACGTCGC CGGGGCAGCC GCCTACGGCT TCGCGCCGGT CTGGGTCAAT CGCGCCGGCC TGCCAGACGA GTACCCGGAC CTCGCTCCGG TCCGGGTGAT AGATCGCCTC GATGCGCTCC TCGGCTGA
|
Protein sequence | MPLLPPLDGA RAVVFDAYGT LLDVHSAVQR HAAAVGPDAR SLSDTWRQKQ LEYSWVLSLC GRYAPFWALT ERALDYALAR HPGVDRGVRS ALLEAYRVLD AYAEVPRTLA ALRAAGLRTA ILSNGDAAML DAALRAAALQ DHLDAVLSVD PAGVFKTSPR AYDLVPERLG VGVSETAFVS SNRWDVAGAA AYGFAPVWVN RAGLPDEYPD LAPVRVIDRL DALLG
|
| |