Gene Mnod_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1263 
Symbol 
ID7308702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1339468 
End bp1340640 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID643599005 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002496567 
Protein GI220921266 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.673224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACAAGC CGCTCGCGGG CATCAAGGTG CTCGAACTCG CCCGCATCCT CGCCGGCCCC 
TGGATCGGCC AGCTCCTGGC GGATCTGGGA GCCGACGTCG TCAAGATCGA GCGGCCCGGC
ATCGGGGACG ACACCCGCTC CTGGGGGCCG CCCTTCGTGG AGGCGGCCGA GGGCGGCACC
CTCTCGGCCT CCTATTTCCA TTCGACCAAT CGCGGCAAGC GCTCGGTCGC GGCGGATTTC
GAGACCGAGG AGGGCCGCGC CGTGGTGCGC CGGCTCGCGG CCCACGCCGA CGTGATGATC
GAGAACTTCA AGGTCGGCGG CCTGAAGAAA TACGGGCTCG ACCACGAGAG CCTGCGGGCG
CTCAACCCGC GCCTCGTCAC CTGCTCGGTG ACGGGCTTCG GCCAGGACGG CCCCTACGCG
CCCCGCGCCG GCTACGACTT CATGATCCAG GGGCTCGGCG GGATCATGTC GCTCACCGGC
GAGCCCGACG GCGAGCCGGT CAAGACCGCG GTCGCCTTCG CGGACGTGTT CACGGGCGTC
TACGGCACGG TGGCGATCCT CGCTGCCCTC CAGGGCCGGC ACGCCACCGG GGAAGGGTGC
CACATCGACA TGGCGCTCCT CGACACACAG GTCTCGGTGC TCGGCAACCA AGCCCTCGTC
TACCTGGTTT CGGGGCTCCT GCCGCCCCGG ATGGGCAACG AGCACACCAG CATCGTGCCC
TATCAGGTTT TTCCGGCGGC GGACGGCCAC GTGATCGTCG CCTGCGGCAA TGACGGGCAG
TTCGAAAAAT TCTGCGGCGT GCTCGGCACG GCGTGGCACC GGGATCCGGC CTATGCCACG
AACCCCGCCC GGGTGACGAA CCGGGCCGTG CTCATCCCCC TCATTGCCGC CGAGACGCAG
CGCCACCCCA AGGCCGAGCT CCTCGCGAAG CTGACCGCCG TGAACGTGCC GGTCGGGCCG
ATCAACGACC TCGCGGAGGT GTTTTCCGAT CCGCAGGTGC TCCACCGCGG CCTGCGGGTC
GATCTCCCGG AGCCCCGCGC CAGGGGCGGC AGCGTGCCGA GCGTGTCCTC GCCCATCGTC
ATCGACGGGG TGCGGATGGT GGCCGAGCGC GCCTCCCCGC AGGTGGGGGA TCACACCGAG
AGCGTGCTGA GCGACCCGGC CTGGGGCGGC TGA
 
Protein sequence
MHKPLAGIKV LELARILAGP WIGQLLADLG ADVVKIERPG IGDDTRSWGP PFVEAAEGGT 
LSASYFHSTN RGKRSVAADF ETEEGRAVVR RLAAHADVMI ENFKVGGLKK YGLDHESLRA
LNPRLVTCSV TGFGQDGPYA PRAGYDFMIQ GLGGIMSLTG EPDGEPVKTA VAFADVFTGV
YGTVAILAAL QGRHATGEGC HIDMALLDTQ VSVLGNQALV YLVSGLLPPR MGNEHTSIVP
YQVFPAADGH VIVACGNDGQ FEKFCGVLGT AWHRDPAYAT NPARVTNRAV LIPLIAAETQ
RHPKAELLAK LTAVNVPVGP INDLAEVFSD PQVLHRGLRV DLPEPRARGG SVPSVSSPIV
IDGVRMVAER ASPQVGDHTE SVLSDPAWGG