| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0140 |
|---|
| Symbol | |
|---|
| ID | 7304375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 150626 |
|---|
| End bp | 151825 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643597916 |
|---|
| Product | hydrolase, peptidase M42 family |
|---|
| Protein accession | YP_002495489 |
|---|
| Protein GI | 220920188 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.138245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGC CCTTCGCGGC CGCGTCCGCG GCGATCGCAT CCGCGCCGAT GCGGATCGAC
GTCGACTACA TGCTCGACTT CCTCAAGCGC CTGATCGAGA TCCCGTCCCC GACGGGCTAC
ACCGATCAGG CGGTGCATTT CTGCGGGCGC GAGCTGGAGC GGCTCGGCGT GCCCTTCGAG
CTGACGCGGC GCGGAGCCAT CCGGGCGACC CTCAAGGGCG CCGGGCCGGG GCCGGCGCGG
GCCATGGTCT CGCACCTCGA CACGCTCGGG GCGATGGTCA AGCAGCTCAA GGACAACGGC
CGTCTCGCGC TCGTGCCGAT CGGGACCTGG TCGGCCCGCT TCGCGGAGGG CGCCCGCTGC
ACGATCTTCA CCGATCAGGG CAGCTACCGC GGCACCATCC TGCCGCTGAA GGCCTCCGGC
CATACCTTCA ACGAGGAGGT CGATACCCAG CCGGTCGACT GGACCAACGT GGAGATGCGG
GTCGACGCCT TCTCCTATCG GGTGGAGGAC CTGCGCCGGC TCGGCTTCAA CGTCGGCGAT
TTCGTCGCCG TGGATCCGAA TCCGGAATTC TCGCCGCGCG GCTACCTCAA TTCGCGCCAT
CTCGACGACA AGGCGGGCGT CGCCGTGATG ATCGCGGCCA TGAAGGCCAT GGCGGATGCC
GGCCGCAAGC CGACGGTCGA TACCTTCATG CTGTTCACCA TCGCCGAGGA GATCGGCGTC
GGGGCATCCT CCGTGCTGCA TGGGGACATC GCCGAGATGG TGACGATCGA CAACGGCACC
GTGGCGCCCG GCCAGGCGAG CCGCGAATCC GGCGTCACGA TCTGCATGGC GGATTCGGCC
GGCCCGTTCG ACTATCACCT GACGCGCCGG CTGATCGAGC TCTGCGAGGC CAACGACATC
CGCTACGAGC GGGACGCCTT CCGGTACTAC CGCAGCGACA GTGCCTCGGC GCTGGAGGCC
GGCAACGATC TGCGCACCGC GCTGATCTGC TTCGGCGTGG ATTCCTCGCA CGGCTACGAG
CGCACGCATG TGAATGCCCT GCGCTCGCTC GCGGAGCTCT CCTGCCTGTA CCTGCAGAGC
GACGTTCTGT TCGGCCGCGA CGTGAAGCCT CTCGGACCGC TCGCCGGCTT CCCGCGCCAG
GAGAGCGAGA GCGCCGATCC GGCAAGCGAG ATGGTCGAGG ACACGATCCT CCCCGGCTGA
|
|---|
| Protein sequence | MNKPFAAASA AIASAPMRID VDYMLDFLKR LIEIPSPTGY TDQAVHFCGR ELERLGVPFE
LTRRGAIRAT LKGAGPGPAR AMVSHLDTLG AMVKQLKDNG RLALVPIGTW SARFAEGARC
TIFTDQGSYR GTILPLKASG HTFNEEVDTQ PVDWTNVEMR VDAFSYRVED LRRLGFNVGD
FVAVDPNPEF SPRGYLNSRH LDDKAGVAVM IAAMKAMADA GRKPTVDTFM LFTIAEEIGV
GASSVLHGDI AEMVTIDNGT VAPGQASRES GVTICMADSA GPFDYHLTRR LIELCEANDI
RYERDAFRYY RSDSASALEA GNDLRTALIC FGVDSSHGYE RTHVNALRSL AELSCLYLQS
DVLFGRDVKP LGPLAGFPRQ ESESADPASE MVEDTILPG
|
|---|
| |