Gene Mmwyl1_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_4343 
Symbol 
ID5367767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4930873 
End bp4932015 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content45% 
IMG OID640806749 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001343173 
Protein GI152998338 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.820276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.551659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGT CATCTAAACG CACTCCGTTA ACTTTTTTAG TTCATGCAAC AGTTTTGTTC 
CTGGTGATTA TCTGGACTAT TCCGACAGCG GGTTTGTTTA TTTCTTCAAT TCGAGATAAA
AACCAGCTAT CAACTTCTGG CTGGTGGACG GCGTTATCGA CCTCTGAACA GCGTTTAGTG
GCCCGTGCCC ATGAACCGAA AAAACAAGTT CAAGAGGGTG ATCGCTTTGT TATTCGCGGT
AACCTATTCG AAGGGTCAGC GGGAGAAGTT ACCAAATTTG GCTCTAGTTC ATTAAGACCC
GATGAATTCG ATGTTGGAAC GGTGGCTGAG CTTAAAAAAG GTGAGACTTT GCAAGTCATG
GAAAACGGCG ACTACGCATT TTCTTCTCCT GTGGAGTGGA AAGGTTCCCG TGGCGACCGC
ATTTTCTATA CGGCCGAGAC GCCACCGCGT TTTACGCTAG AAAACTATCG CGAAGTATTG
AATGCCGAAG GGTTGGGTAA GTCTTTTATT AACTCGTTAA CGGTTACCAT ACCTGCGACC
ATTATTCCTA TTTTAGTGGC TGCGTTTGCC GCGTATGCAC TGGCTTGGAT GCGTTTTCCT
GGGCGTGCAT TGCTAGTTGC GGCTGTGGTT GGTTTATTAG TTGTTCCGTT ACAGATGTCA
CTGATTCCGC TGTTGAAAAC CTATAATCTG ATTGGTGAGT TTTTTGGTGT CGGATCAAAA
ACCTATGTAG GGATTTGGTT AGCGCATACC GGTTTTGGTT TGCCGTTGGC GATTTATCTA
CTGCGCAACT ATATTGTTGG TTTACCAAGA GAAATTATTG AATCCGCCCG TGTTGATGGT
GCTTCCGATT TTGATATTTT CCGTAAGATT GTATTACCGC TGTCTTTTCC TGCATTGGCG
TCATTTGCCA TCTTCCAATT CTTATGGGTA TGGAATGATT TGCTGATTGC CATGGTATTC
CTAGGTAATG ATGCAGATCA CATGGTGTTA ACAGGCCAGC TTCGCGAATT GCTTGGCTCT
CGCGGTGGTA ACTGGGAAAT TCTGACGGCA TCGGCGTTTA TTACCATCAT TATTCCTTTA
TGTGTCTTCT TTGGCTTACA GCGTTATCTA GTACGCGGTT TGCTAGCAGG CTCGGTGAAA
TAA
 
Protein sequence
MITSSKRTPL TFLVHATVLF LVIIWTIPTA GLFISSIRDK NQLSTSGWWT ALSTSEQRLV 
ARAHEPKKQV QEGDRFVIRG NLFEGSAGEV TKFGSSSLRP DEFDVGTVAE LKKGETLQVM
ENGDYAFSSP VEWKGSRGDR IFYTAETPPR FTLENYREVL NAEGLGKSFI NSLTVTIPAT
IIPILVAAFA AYALAWMRFP GRALLVAAVV GLLVVPLQMS LIPLLKTYNL IGEFFGVGSK
TYVGIWLAHT GFGLPLAIYL LRNYIVGLPR EIIESARVDG ASDFDIFRKI VLPLSFPALA
SFAIFQFLWV WNDLLIAMVF LGNDADHMVL TGQLRELLGS RGGNWEILTA SAFITIIIPL
CVFFGLQRYL VRGLLAGSVK