Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4081 |
Symbol | |
ID | 5366906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 4611768 |
End bp | 4613450 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640806474 |
Product | choline dehydrogenase |
Protein accession | YP_001342912 |
Protein GI | 152998077 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | [TIGR01810] choline dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACG AAACGTACGA TTACATCATT GTCGGTGCTG GCTCTGCAGG CTGTGTGTTA GCGGACCGAC TAACCGAAAG TGGCGAACAC AAAGTGCTGT TGCTGGAAAT GGGTGGCTCA GATAAGAGCG TCTTTATCCA AATGCCAACC GCTTTGTCTT ATCCCATGAA TACCAACAAA TACGCTTGGC AATTTCATAC CGAAAAAGAA CCCGGCCTTG ATGGCCGTGA AATGCATTGT CCACGCGGCA AAGTACTAGG CGGTTCATCG TCTATCAACG GCATGGTTTA TGTGCGTGGT CACGCTTGTG ATTTCGACCA ATGGGAAGAA AACGGCGCCA AAGGCTGGAA CTACCAATCT TGCCTACCCT ATTTCAAAAA AGCCGAAACA TGGAAAGGCG GCGCGGACTT ATACCGTGGC GGCAATGGCC CATTGTCGAC CAACAACGGC AACGACATGA CCTACAACCC GCTTTACCAA GCCTTTATCG ATGCTGGCGA AGAAGCCGGC TACGGCAAAA CGGAAGATTA CAATGGCTTC CGTCAAGAAG GTTTTGGTCC CATGCACATG ACGGTTAAAA ATGGCGTGCG TGCATCTACA GCTAACGCCT ACTTACGTCG TGCTATGAAG CGCCCTAACC TAACTCTCAA AACTGGCGTG TTAAGCCATA AAGTCCTCTT TGCAAATGGA AAGGCCAATG GCAAAACCGC CACGGGCATT GAGTTCAGTA AAAACGGCCA AACTCAACAA GCCAATGCCA GCAAAGAAGT GATTCTATCG GCTGGCTCGG TTGGTTCACC ACAGTTGTTA CAACTGTCTG GCGTAGGTCC AAAAGACGTC TTGGAAAAAG CCGGCGTGCC TGTGGTTCAT GAATTACCGG GCGTAGGTGA AAACCTGCAA GACCATTTGG AAGTCTATTT CCAGTACTAC TGCAAACAAC CCGTGACGCT AAACAGCAAA CTTGGCTTGA TCAGCAAAGG CTTGATTGGT ACCCGCTGGA TGTTATTTAA AACCGGACTG GGTGCAACTA ACCACTTTGA ATCTTGTGGT TTTATTCGCT CGCGCTCTGG ACTGAAATGG CCAAACATTC AATATCACTT CTTGCCAGCC GCCATGCGCT ACGATGGACA AGCCGCCGTG AAAGGTCATG GTTTCCAAGT ACATGTTGGA CCAAACAAGC CAGAAAGCCG TGGTAAGTTA TGGATCGAGT CTGCTAATCC AGCTGCGAAA CCGCGTATCT TGTTTAACTA CATTTCGACC GAGCAAGACA AGCAAGATTG GCGCGATACC ATCCGCCTAA CACGTGAGGT CTTGCAACAA TCTGCGTTAA ACGAATACCG TGGTGATGAA ATTCAGCCAG GCATGAATAT TCAGAGCGAT GAAGAAATCG ACCAATGGGT AAGAGAGAAC GTAGAAAGTG CTTACCATCC ATCTTGTACT TGTAAGATGG GCGACGACAA GGATCCAATG GCCGTGTTGA ATGAACAGTG CCAAGTGCGC GGAATCGAAA ACTTGCGCGT GGTGGATTCG TCTATATTCC CGACCATCAC CAACGGCAAC TTAAACGCAC CAACTATCAT GGTAGCGGAA AAAGCCGCCG ACATGATACT TGGTAAAGAC ACCTTGCCAA GCCTAAATGC GCCCGTTTGG ATTCACCCAG AATTTGAAAC CAAACAGCGT TAA
|
Protein sequence | MANETYDYII VGAGSAGCVL ADRLTESGEH KVLLLEMGGS DKSVFIQMPT ALSYPMNTNK YAWQFHTEKE PGLDGREMHC PRGKVLGGSS SINGMVYVRG HACDFDQWEE NGAKGWNYQS CLPYFKKAET WKGGADLYRG GNGPLSTNNG NDMTYNPLYQ AFIDAGEEAG YGKTEDYNGF RQEGFGPMHM TVKNGVRAST ANAYLRRAMK RPNLTLKTGV LSHKVLFANG KANGKTATGI EFSKNGQTQQ ANASKEVILS AGSVGSPQLL QLSGVGPKDV LEKAGVPVVH ELPGVGENLQ DHLEVYFQYY CKQPVTLNSK LGLISKGLIG TRWMLFKTGL GATNHFESCG FIRSRSGLKW PNIQYHFLPA AMRYDGQAAV KGHGFQVHVG PNKPESRGKL WIESANPAAK PRILFNYIST EQDKQDWRDT IRLTREVLQQ SALNEYRGDE IQPGMNIQSD EEIDQWVREN VESAYHPSCT CKMGDDKDPM AVLNEQCQVR GIENLRVVDS SIFPTITNGN LNAPTIMVAE KAADMILGKD TLPSLNAPVW IHPEFETKQR
|
| |