Gene Mmwyl1_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3414 
Symbol 
ID5365414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3858426 
End bp3859067 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content40% 
IMG OID640805786 
Productcytochrome c-type biogenesis protein CcmB 
Protein accessionYP_001342252 
Protein GI152997417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGT TTTTGGTGTT GTGGCGTCGT AAACAAGACG TTTTTAACGC ATTGCTGTTT 
TTCATTATTG TGGTTGCCTT ATTTCCGATA GGAATTAATT CTTCACCTGA TTTTCTGGCG
CCAGCGGCGG CAGGTATTGT CTGGTGTGCT GCTGTATTAG CTATCTTGAT GGCTGTAGAA
AGTATGTTCA AAGAAGATTA TCTAGATGGA TCCTTGGAGC AGCTGGTTGT TAGTGGATTA
TCACTGCCTT TATTAATTTT GTTAAAAGTC GCCGCGCAAT GGCTGGTCGT TGTATTACCT
TTGCTTGTGA TAATCCCTTT ATTAAGTGAG ATGCTATATC TGCCAAGTTC AGGTTTTTGG
GTGTTGATCA TGACCTTAAT TGTAGGTACA CCTAGTTTGT TTTTTATTGG TGTAATTGGT
GCAGCTTTAA CGGTATCGAT AAAACAAGGC GCCATGTTGG TGATGTTGCT GATATTGCCG
TTTTATTTGC CAGTGATTAT TTTTTCAACG TTAGCCGTTA AAGCTACACA ATCAGGTTTG
CCTTATTCTG GATTATTGGC GATGTTATTG GCGATGTCTT TGTTATCTTT AGTGATATCG
CCTTTTATGA CGGCGATTGT AGTCAAAGCG AGTGTAAACT GA
 
Protein sequence
MSEFLVLWRR KQDVFNALLF FIIVVALFPI GINSSPDFLA PAAAGIVWCA AVLAILMAVE 
SMFKEDYLDG SLEQLVVSGL SLPLLILLKV AAQWLVVVLP LLVIIPLLSE MLYLPSSGFW
VLIMTLIVGT PSLFFIGVIG AALTVSIKQG AMLVMLLILP FYLPVIIFST LAVKATQSGL
PYSGLLAMLL AMSLLSLVIS PFMTAIVVKA SVN