| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3308 |
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| Symbol | |
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| ID | 5366819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3745858 |
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| End bp | 3748278 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640805682 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001342148 |
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| Protein GI | 152997313 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTG TATTTTCAAA ATCATTGTTT ACTAAACAAG CAATTTTAAC GCTAGCGCTT
GCCATTATTT TAAGTTTAGT AAGCAGCGCT ATTCAATTTA TTGATGGAGT ACGATCTCAG
AAAGCGGAAA TAAACCAAGA TTTTAATGTT TTGCTTGCGG CAATTGAAAA ACCTTTAGCC
GAAGCTATTT TCCGTTTAGA TACGCCGTTC GCTCAGCAGC AAATTGATAG TTTACTTTTT
AATCCTGCTA TTGCTCATGT GGAAGTTCGT GACGAAAGTG GTGAACTGTT TGTAGAAGCT
ACCACAACAA ATAATGACTT CTCTGTCTCG GATGGATTGG CCAACTATTT TTTATCTGAT
TTACAGGATT ATCGGCGAGA GCTTAGTTTG GACACTCCTG CTTTTCAGGC GGGTTATGTG
CTTATATTGC CTGAAAAACA TTTCTTGCTT GATACAATAT TTAAAGAACA TCTTTCTAGT
TTAACCTATA ACCTGTTCAA AGATGTGTTG TTGGCATCAT TGATATCCTT AGTTTTTTAC
TTTTTAGTTA CTCATCCTTT GATGCGCCTC ACTGAGTCTT TATCGATTGT TGGTTATAAA
AAAGAGTTGC CATTACCTCA GTCATTTTAT CGGTACCATA AGTCTGATGA ACTAGGGAAT
TTGCATTCTA CTTTCGCCGT TTTATGGAAG CGTTTAAATA CTGCACTGAG TGATTTAGAG
CGAAGTGATA GTCATACAAA AGCTATGATT GAACATGCTG CGGATGGTAT TTTGCTTTTA
GATGAGAACT ACCAAATCAC CTTAGTGAAT GCGGCAGCAG AGCATATGTT GAAGATGAAA
AGTGAAGATT TGAACTCAAA GTCTTTAGAT GTGTTGCATT CCCCTTCGTC TTGGCCTGAA
TTTTTTAATA TTTTAGAGTC GCTGGAAGTG AACTCTCCTA CAACGGTCGA AACAATTTAT
CGAATGCAGG GAATTGAACT ACCAGTCGAG ATTCGATTAG CTAAATATAA AGTACAAGAT
AAAACAGAGA CCTTATTACT GATTCGCGAT GTTTCTGAAC GCAAAGAAAC AGAGGCTCGT
ATTCATCATT TAGCGTATTA CGATTCAGTC ACCAACCTGC CAAATCGCCA GTATTTAGCC
GATAAACTTT ATAAAGCAAT AAAGACTAAA CAGAAAAATA CTACTTCAAG TTACTCCGCT
GTGGTGTTTA TGGATCTGGA TAGATTCAAA ACCATTAATG ATTCACTAGG TCATAACGTG
GGTGATCAGC TACTTTGCTG TGTGGCAACG CAGCTGTCTT CACTAACTGA AGAGAATATT
GTGTTTGCCC GCATGGGGGG AGATGAGTTT GCTTTTTTAC TTACTCATGT TGGTGATGAT
AAGGAAAAAG TAGAAAAAGC AATCAACGGT TTTGTTGAAA GTGTTATGTA CGCCTGTCAG
CAAGTTAAAA AGGCGGGGCA CCATGAAGTT CACATCACTG CCAGTCTAGG AGCCACAATC
TTTGATGGCA ATGAAGGATC GGCAGAAGCG ATTTTAAAGC AGGCTGATAC GGCTTTGTAT
CGCGCTAAGG AATCTGGACG TAATACCTTT GCTTTATATA AACCAGAGAT GCAGGCGGTT
TCAGATGCAC GCCTTGAGAT GGAAAAAGCA CTTCATCATG CGACAGAATT TAAGTTGTTT
GAGTTGTATT ATCAGCCACA AACCAATGAT AAAAATGAAT TGATTGGTGC AGAAGCGCTG
ATTCGTTGGA AGGACGAGAA AAAGGGTTTT ATTTCCCCTG CTGAGTTTAT TCCCGTGGCA
GAAGAAATAG GACTTATTGT TGAAATTGGT CATTGGGTTT TAAATGAAGC TTTGTCCCAA
GTGGCGACTT GGTTGAAAGA GGGGAAGTGG CAATTATCAT GGCGTATGTC GATTAATGTG
AGTCCTATTC AGTTTCAACA AGCAGGTTTT TTACCTATGT TGAAAACACA GTTAGAAAAA
CATGATGTTC CGCCAAGTTG TGTTGATCTG GAAATCACGG AAAATATGCT ACTGAACGAC
CTTTCATCTT GTTTGAAAAA AATGAATGCC ATAAAAGCCT TGGGTGTGCA TCTTTCTATT
GATGACTTTG GTACTGGTTA TTCATCACTG AAATATTTGA AATCTTTACC AATAGATAGA
TTGAAAATTG ATCAGTCTTT TGTGAGAGAT TTACTCACAG ATAAAAGCGA TGAAGCGATA
GTGCATGCGG TCATAGCTAT GGCCAAAGCG CTCAATATTA GTGTTCTTGC CGAAGGTGTA
GAGACCTTGC TTCATTATAA TCGATTAAGA GAGATAGATT GTTTTTATTA CCAGGGTTAC
TATTTTGGTC ATCCTGTACC CCCAAACGAA TTTATTGCTG CATTTGTTCA TGATTCAGCC
ACGCTGAAGC CTTCTTTGTA G
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| Protein sequence | MGVVFSKSLF TKQAILTLAL AIILSLVSSA IQFIDGVRSQ KAEINQDFNV LLAAIEKPLA
EAIFRLDTPF AQQQIDSLLF NPAIAHVEVR DESGELFVEA TTTNNDFSVS DGLANYFLSD
LQDYRRELSL DTPAFQAGYV LILPEKHFLL DTIFKEHLSS LTYNLFKDVL LASLISLVFY
FLVTHPLMRL TESLSIVGYK KELPLPQSFY RYHKSDELGN LHSTFAVLWK RLNTALSDLE
RSDSHTKAMI EHAADGILLL DENYQITLVN AAAEHMLKMK SEDLNSKSLD VLHSPSSWPE
FFNILESLEV NSPTTVETIY RMQGIELPVE IRLAKYKVQD KTETLLLIRD VSERKETEAR
IHHLAYYDSV TNLPNRQYLA DKLYKAIKTK QKNTTSSYSA VVFMDLDRFK TINDSLGHNV
GDQLLCCVAT QLSSLTEENI VFARMGGDEF AFLLTHVGDD KEKVEKAING FVESVMYACQ
QVKKAGHHEV HITASLGATI FDGNEGSAEA ILKQADTALY RAKESGRNTF ALYKPEMQAV
SDARLEMEKA LHHATEFKLF ELYYQPQTND KNELIGAEAL IRWKDEKKGF ISPAEFIPVA
EEIGLIVEIG HWVLNEALSQ VATWLKEGKW QLSWRMSINV SPIQFQQAGF LPMLKTQLEK
HDVPPSCVDL EITENMLLND LSSCLKKMNA IKALGVHLSI DDFGTGYSSL KYLKSLPIDR
LKIDQSFVRD LLTDKSDEAI VHAVIAMAKA LNISVLAEGV ETLLHYNRLR EIDCFYYQGY
YFGHPVPPNE FIAAFVHDSA TLKPSL
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