| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3260 |
|---|
| Symbol | |
|---|
| ID | 5367520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3694051 |
|---|
| End bp | 3696306 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805635 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
|---|
| Protein accession | YP_001342101 |
|---|
| Protein GI | 152997266 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.625652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000240125 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATA AAGAACTAGA ACAAACCCTG AACACGGCTT TTAAAGCGGC GCGTGACAAG
CGTCACGAAT TCATGACGGT TGAGCATTTA TTATTAGCTC TTATTGAAAA TGGCGCTGCT
TCAAGCGTCC TCAAAGCATG TGGTGTGAAT TTAGATACCT TAAGTAAGGA GCTTGAGGAA
TTTGTTGACA GTACGACACC TCTAATCCCT GAAGACGACG ATGAGCGTGA AGTTCAGCCA
ACTTTAGGTT TCCAGCGCGT ATTACAGCGT GCGGTTTTTC ATGTTCAATC TTCTGGTAAG
CGCGAAGTCA CAGGTGCCAA CGTGCTGGTG GCTATTTTTA GCGAACAAGA ATCTCAAACC
GTTTATCTTT TAAAGCGTCA TGGTGTGGCT CGAATTGATG TGGTCAATTA TGTGGCTCAC
GGTATATCTA AAACAGGTGA AGCGTCTTCG CAGGACATGG ATCATGATGA CGAAGCAGAA
GATACAGCGA CTGCGCCGTT GCAAAAATTC GCAACCAATC TTAACGAAGA AGCCAAAGCT
GGGAAAATCG ATAAATTAAT CGGTCGTGAA TACGAAGTGG AGCGAGTGAT ACAAACACTT
TCTCGTCGTC GTAAAAACAA TCCTTTGCTG GTTGGTGAGT CAGGTGTTGG TAAAACGGCC
ATTGCTGAAG GGTTGGCGCG TCGCATTGTT GATGGGCAAG TGCCAGAAGT TATTGCTGAT
GGTGTTGTTT ATTCCCTAGA TTTGGGGGCG TTACTAGCCG GAACAAAATA CCGCGGTGAT
TTTGAAAAAC GCCTTAAGCA GTTATTAGGT GAATTAAAAA AATTGCCGAA TGCGATTCTT
TTTATTGATG AGATTCATAC CATCATTGGC GCAGGGGCTG CATCTGGTGG GGTAATGGAT
GCTTCTAATC TGCTTAAGCC AGTATTGAGT TCTGGTGGCT TACGTTGCAT TGGCTCTACA
ACATTCCAAG AATTTCGTGG CGTGTTTGAA AAAGACCATG CCTTAGCGCG TCGTTTCCAA
AAAATTGATG TAAACGAGCC AAGTGTTGAT GATACTTATC AAATCTTGAA AGGCATCATT
GGTGCATTTG AAGAACATCA TAAGGTGAAG TACGAAGAGC CAGCTTTATT AGCAGCAGCA
GAGCTTGCTC AACGTTATGT GACAGATCGT CATATGCCTG ATAAAGCGAT TGATGTTATA
GATGAAGCAG GAGCTTACCA GCGCTTGCAA CCAGAAGGTA AACGTAAAGC GGTTATCACG
GTTGCAGATA TTGAAGATAT CGTTTCTAAG ATCGCCAGAG TACCTGTGAG AGCTGTTAAC
TCTGACGATA GACAAGTACT GTCTAATCTT GAACGTAACC TAAAAATGGT GGTTTTCGGT
CAAGATAATG CCATTGATGC CTTGTCTGCT GCGATTAAGT TGTCTCGTGC TGGTTTAAAA
GCCGAACAGA AACCTATTGG TTCTTTCTTG ATGGCTGGTC CAACAGGTGT TGGTAAAACG
GAAGTGACCA AGCAGCTTGC CAAGCAATTG GGACTTGAGT TGATTCGCTT TGATATGTCT
GAGTACATGG AGCGCCATGC GGTATCTCGA TTGATTGGTG CGCCACCAGG CTATGTTGGT
TTTGATCAAG GTGGTTTATT GACAGAAGCT GTGACGAAAA ATCCTCATAG TGTTGTGTTA
TTGGATGAGA TAGAAAAAGC TCACCCAGAG GTCTTTAACT TGCTTCTGCA AGTAATGGAT
CATGGTACCT TGACTGATAA CAATGGACGC AAAGCAGATT TCCGTAATGT GATCTTAGTG
ATGACGTCGA ATGCTGGTGC TCAAGAGTTG GCTCGTCGTT CAATTGGCTT CTCTAGTCAA
GATAACTCGA CGGATGGTAT GGAGGTTATT AATCGAACCT TTACACCTGA ATTTAGAAAC
CGTTTAGATG CTGTTATTCA GTTCCAGCAA CTGGATGAAC GTATTATCTT TAACGTGGTA
GATAAGTTCT TGGTGGAGCT ACAGGCTCAG TTAGACCCGA AAGGTGTCTT GCTAGAGGTC
TCAGACACTG CCAGAGGCTG GTTAGCCAAT AAAGGTTATG ACCGTCAGAT GGGGGCGCGT
CCAATGGCTC GTGTCATTCA GGAGCATTTG AAGAAGCCGC TAGCGGATCA TATCCTCTTT
GGTGATCTTC ATGATGGTGG TCATGTTAAA GTGGCTTTGG ATGAAAAGAG TGATGAGTTG
AAATTTGAAG TCATCAAAGA GGCGGTTGTG CATTAG
|
|---|
| Protein sequence | MLDKELEQTL NTAFKAARDK RHEFMTVEHL LLALIENGAA SSVLKACGVN LDTLSKELEE
FVDSTTPLIP EDDDEREVQP TLGFQRVLQR AVFHVQSSGK REVTGANVLV AIFSEQESQT
VYLLKRHGVA RIDVVNYVAH GISKTGEASS QDMDHDDEAE DTATAPLQKF ATNLNEEAKA
GKIDKLIGRE YEVERVIQTL SRRRKNNPLL VGESGVGKTA IAEGLARRIV DGQVPEVIAD
GVVYSLDLGA LLAGTKYRGD FEKRLKQLLG ELKKLPNAIL FIDEIHTIIG AGAASGGVMD
ASNLLKPVLS SGGLRCIGST TFQEFRGVFE KDHALARRFQ KIDVNEPSVD DTYQILKGII
GAFEEHHKVK YEEPALLAAA ELAQRYVTDR HMPDKAIDVI DEAGAYQRLQ PEGKRKAVIT
VADIEDIVSK IARVPVRAVN SDDRQVLSNL ERNLKMVVFG QDNAIDALSA AIKLSRAGLK
AEQKPIGSFL MAGPTGVGKT EVTKQLAKQL GLELIRFDMS EYMERHAVSR LIGAPPGYVG
FDQGGLLTEA VTKNPHSVVL LDEIEKAHPE VFNLLLQVMD HGTLTDNNGR KADFRNVILV
MTSNAGAQEL ARRSIGFSSQ DNSTDGMEVI NRTFTPEFRN RLDAVIQFQQ LDERIIFNVV
DKFLVELQAQ LDPKGVLLEV SDTARGWLAN KGYDRQMGAR PMARVIQEHL KKPLADHILF
GDLHDGGHVK VALDEKSDEL KFEVIKEAVV H
|
|---|
| |