| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2781 |
|---|
| Symbol | |
|---|
| ID | 5365586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3149692 |
|---|
| End bp | 3152091 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640805156 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001341629 |
|---|
| Protein GI | 152996794 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.413294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA TCAAAAATTG GAAGCTTCTT GGTGTTGAAA ATAACCGTGT AGACATTGAA
TGTGATGATC GTCACGTTTT GCACTTTTTT GTATTAGAGT CCAACGTGAT TCGCGTTTTG
TTGAAAAAGA ACAAAACCTT GCAACTTGAA AACAGTTGGT GCATTTCCCC TAATGACAGC
CTAAATGGCA GTGAAATGAA CTGGCAAGGT CGCGATCGCA TGAGCACAGA AGGGTTCTCC
TGCCCTGATT TTAAGCTGTC TGAACAAGAT GATCAGTTGA CCATTGCTAC GTCTTCTCTT
CGAGTCACTT TGTCAAAACC GTTGAAATTG ACGTGGGAAT ACGCTGATGC TGCTGGCGAA
TGGCATTATC TTGCTGCGGA CCGCCATAGT GGTGCGTATA TGTTGGGAGT GCAATCTAAT
GATATTCACC ATTACATGGC CCGAGATTTG TCAGAGAAGT ATTACGGGTT AGGTGAGAAA
ACCGGTGACT TAAATCGCCA CGGTTCGCGC TACCAAATGC GTAATATCGA TGCCATGGGT
TACGATGCGA AAAACACCGA TCCATTGTAC AAACACATTC CTTTTTACAT CACCAAAACT
GAACAAGCGA GTTTCGGTAT TTTCTACGAT AACTTGTCAA CCAGTTGGTT TGATTTGGGT
AACGAGCTAG ACAATTATCA TGGTTACTAC CGTAGCTATC ATGCTGATGA GGGGGATCTA
GATTTCTACT TCATGTACGG TGAAAAAGTT CTAGATGTTA CGAAAACCTA TGTGAATTTG
ACGGGGCGAA CCATTTTTGG TCCAAAATGG AGCCTTGGTT ATAGTGGCTC CACCATGCTT
TATACGGATG CTGAAAACGC TCAAGAGCAA CTGGGTGATT TTATTAAGCA CTGCGACAAT
CACAGCATGC CTTGCGACTC TTTCCAGCTT TCTTCTGGTT ATACCTCGAT TGGCAATAAG
CGTTATGTGT TTAATTGGAA CACCAGTAAG GTGCCAAACC CGCTTAAATT GAGTGAGGAC
TTTCATCAAG CCGGTCTTAA ACTGGCAGCC AATATCAAGC CGTGTTTGCT GCAAGACCAT
CCACGATTCG AGGAAGTGGC GTCGCAAAAT TTATTCATTC AAGACTCAGA GTTTGATGCG
CCTGAATCTT CTCAGTTTTG GGATGATTCT GGCTCACATC TAGATTTTAC CAACCCGAAT
ACCATCCAGT GGTGGAAACA AAATGTCACT GAGCAATTGC TTGAAAAGGG CATCGATTCC
ACTTGGAATG ACAATAACGA ATACGAAGTT TGGGATGGTA ACGCTCGTTG TGTTGGCTTT
GGTAAATCGA CGTCAATTAA GCTGATTCGT CCATTGCAAC CGTTGTTAAT GATGCGCGCT
TCTTATGAAG CCCAAACCGA ATTTGCACCT AACTTGCGAC CTTATTTGAT CTCGCGTTCT
GGTTGTCCTG GCATGCAACG CTATGTGCAA ACTTGGAGTG GTGATAACCG TACCAACTGG
CAAACCCTGC GTTACAACAC TCGTATGGGC GTGGGAATGA GCCTTTCTGG TTTGTACAAC
CTTGGTCACG ATGTCGGTGG TTTCTCTGGT GATCGTCCAG ACCCAGAACT CTTTGTTCGC
TGGGTACAAA ATGGCGTCAT GCACCCACGT TTTACTATCC ACTCTTGGAA TGATGATAAA
ACGGTTAACG AACCTTGGAT GTACCCAGAA GTAACGCCAA TCATTCGTGA AGCCATGACA
TTGCGTTACC GTCTGATGCC GTATTTATAC GATCTACTTT GGCAGGCGCA CAAAGATCAT
GAACCTATGT TGCGTCCGAC TTTCTTGGAT CACGAGGCTG ATGCTCGTAC CTATGAAGAA
AGCGACGACT TCTTATTGGG TAAAGACTTA TTGGTAGCGT CTGTCGTAGA GCAAGGTCAA
CGCACACGCC CCGTGTATTT GCCTGACAAT GGCGATGGTT GGTATGACTT CCACCGTAAG
ACTTGGTATG CCGGTGGACA AGACATTAGC TTACCCGCCG CTCTAGAAGA GATTCCGCTA
CTGGCTCGTG CTGGCAGTGT AATTCCGACT AGCAGCCGAA TAGCCCATGT GGATGCTGAA
AAAGATACTC AGCGTCAGTT GCTTGTTTTC CCATTTAAAG GGGCAGGTCA GCGTGACTTA
TCCGTGTTTG ATGATGATGG GCTTTCAACT GGCTATTTAG ATGGCAAGTA TCTGTTGCTG
AACATAACGT TGAAATCTGA TCTTGAACGA ATTGATCTCA ATATTTCACG AGAAGGTGAA
TGGCAGCCAG CTTACAAAGA AGTGAGTTTT GTTCTGCCAG ACAATGAGCA ACGTCCTTTC
TATGTGAACG GCAAGCGTGT TGAGCGTTCT CAACTTATCG CACTAAGTAG CCTTAAATAA
|
|---|
| Protein sequence | MKPIKNWKLL GVENNRVDIE CDDRHVLHFF VLESNVIRVL LKKNKTLQLE NSWCISPNDS
LNGSEMNWQG RDRMSTEGFS CPDFKLSEQD DQLTIATSSL RVTLSKPLKL TWEYADAAGE
WHYLAADRHS GAYMLGVQSN DIHHYMARDL SEKYYGLGEK TGDLNRHGSR YQMRNIDAMG
YDAKNTDPLY KHIPFYITKT EQASFGIFYD NLSTSWFDLG NELDNYHGYY RSYHADEGDL
DFYFMYGEKV LDVTKTYVNL TGRTIFGPKW SLGYSGSTML YTDAENAQEQ LGDFIKHCDN
HSMPCDSFQL SSGYTSIGNK RYVFNWNTSK VPNPLKLSED FHQAGLKLAA NIKPCLLQDH
PRFEEVASQN LFIQDSEFDA PESSQFWDDS GSHLDFTNPN TIQWWKQNVT EQLLEKGIDS
TWNDNNEYEV WDGNARCVGF GKSTSIKLIR PLQPLLMMRA SYEAQTEFAP NLRPYLISRS
GCPGMQRYVQ TWSGDNRTNW QTLRYNTRMG VGMSLSGLYN LGHDVGGFSG DRPDPELFVR
WVQNGVMHPR FTIHSWNDDK TVNEPWMYPE VTPIIREAMT LRYRLMPYLY DLLWQAHKDH
EPMLRPTFLD HEADARTYEE SDDFLLGKDL LVASVVEQGQ RTRPVYLPDN GDGWYDFHRK
TWYAGGQDIS LPAALEEIPL LARAGSVIPT SSRIAHVDAE KDTQRQLLVF PFKGAGQRDL
SVFDDDGLST GYLDGKYLLL NITLKSDLER IDLNISREGE WQPAYKEVSF VLPDNEQRPF
YVNGKRVERS QLIALSSLK
|
|---|
| |