Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2286 |
Symbol | |
ID | 5365917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2573008 |
End bp | 2573919 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640804646 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001341143 |
Protein GI | 152996308 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TCATGGAATA CGATCTTAAT GCTGTAAGGC AATTTATTAA AGTGGCAGAA AATCTGAGTT TTACTGTTGC CGCTCAACAA TTAGATGTGA CTCAATCTGG TATCTCTAGA GCAGTCAATC GCTTGGAATC CCAGTTAGGT CTTCGTCTAT TGCACCGTAA TACGCGTAAT TTAAAGTTAA CAGTAGATGG CGAGTTATTT TTAAAACGTG TTAAGCCGTT AGTTGGCGGC CTTGAAGAGG CGCATCAAGA GTTGCTGGAA TATGGTCTTG AACCTAAAGG TTGCTTAAAA ATTAGTGCAC CATCAGCTTT TGGTCGGGCT GTTGTTATGC CTATTATTGC TAAATTATTG GATGAGTACC CACAGCTCAC TATAGAGTTG GTATTAACTG ATCGAATAGT TGATCTGGTA GGAGAAGGCT TTGATGCTGT CATTCGTAGC GGAAATATTC AGGATAGCCG CGTGATTGCG CGGCCCCTTA AAGCTGCTGG CTGGGTGACA GTTGCATCAC CAAAATACCT TAATACTTAT GGCTCTCCAA AGACGTTAGA GGAATTGCCT GCACATAATT GTATGCAAGT TAGAAATCCT GTTACTGGGC AATTGTTTCC TTGGACATTT CGGAATAATG AGAGGGATAA AGACTTTCCC ATTAGAGGGA GCTTAGTTGT TGATCATGGA GATCCTTTAG TAGAAGCCGC GTTATTGAGT ATTGGTATGG CACAATTGAT GACTTTTTTC GTAGAGGATT ATTTGAAAGA CGGGTTGTTG ACGCCCGTTT TAAATGAATA TGCTCGATCA TCGACGCCTT TAACACTTCT CTATCCATCC GCTCGACATC GATCAGCCAA GTTAATGATG TTTCGTGATG CGTTGCTTGA GCACTGGGGT GGGCGTGAGT AA
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Protein sequence | MNKIMEYDLN AVRQFIKVAE NLSFTVAAQQ LDVTQSGISR AVNRLESQLG LRLLHRNTRN LKLTVDGELF LKRVKPLVGG LEEAHQELLE YGLEPKGCLK ISAPSAFGRA VVMPIIAKLL DEYPQLTIEL VLTDRIVDLV GEGFDAVIRS GNIQDSRVIA RPLKAAGWVT VASPKYLNTY GSPKTLEELP AHNCMQVRNP VTGQLFPWTF RNNERDKDFP IRGSLVVDHG DPLVEAALLS IGMAQLMTFF VEDYLKDGLL TPVLNEYARS STPLTLLYPS ARHRSAKLMM FRDALLEHWG GRE
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