| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1880 |
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| Symbol | |
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| ID | 5367812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 2129504 |
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| End bp | 2130457 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640804227 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001340739 |
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| Protein GI | 152995904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.460702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTT ACCAAGCAGT TGTCTGCACA GCCCTCGGTT TAGCAGTGGC ACAGTTGAGC
GTCGCTCAAA GTCAAATTAC CTTTAAATCA GCTAAGACTA GCTCTTCTTA TTATCAAATG
GCGGTTGAAA TTGCTCAGGC GGTAAAAAAA GATACTAACA GCAACATTAT TGTTACTGTC
GAAGAAAGCC AAGGCTCTGT GCAAAACGTC ATGGAAACAG CCTTTCGAGG CGCCAATTAT
GTATTTACAA CGCCACCAGC GTTAGTCAAT TTGGCGCAGA ACGGCCAAGC AATGTTCAAA
AACAAAAGCA ATCCTAAATT TAGCGAGATT CGAGCTCTTT TTCCAATTCC TTCCCTAGCA
ATGCATTTTG TCGTATCCGA TAAAAGTGGG ATTAATAACT TTGCAGGAAT GGCGGGTAAA
AAGATATTGC TTGGCAAAGG CACTTTTGGA GCAAATGAAG GCGCTAAGTA CATCCAACTA
TTTGGTTTAG AAGATAAAAT CGACCTTGCT CAGGTAGAGC TTTCTAATGC TGTTCCAGCC
TTGAAAAATG GTCAAATTGA CGGTTTTGTT ACCTCTGGCT CTTTTCCAGC TCCTAATGTA
GTCGAAGCCT CAGCCGGAAC CAAAGTGAAG ATATTATCCT TTAGCGATGA CCAAGTAGCA
CAAACAAAAC GTACCAAATT GATTATTCCT GCAGGGACTT ATGCTGGACA AGATACAGAC
ATCACAACAA CCTCATTACC AGTTGTCGTA TATACAAGCT CTGCAATGGA TGATGAAACA
GCATACACAT TAACCAAAGC CTTTTGGGAT CAAAAAAAGA ACATGTCCGA TTCATCTCCT
TGGTGGAAAG GCGTCACTAC TGAAATGCTT GATAATATCA ATGGTAAAAT CCATCCAGGT
GCAGCAAAGT ATTATCATGA AATTGGCGTC ACTCTAAACG AAAATCAGCA ATAA
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| Protein sequence | MKFYQAVVCT ALGLAVAQLS VAQSQITFKS AKTSSSYYQM AVEIAQAVKK DTNSNIIVTV
EESQGSVQNV METAFRGANY VFTTPPALVN LAQNGQAMFK NKSNPKFSEI RALFPIPSLA
MHFVVSDKSG INNFAGMAGK KILLGKGTFG ANEGAKYIQL FGLEDKIDLA QVELSNAVPA
LKNGQIDGFV TSGSFPAPNV VEASAGTKVK ILSFSDDQVA QTKRTKLIIP AGTYAGQDTD
ITTTSLPVVV YTSSAMDDET AYTLTKAFWD QKKNMSDSSP WWKGVTTEML DNINGKIHPG
AAKYYHEIGV TLNENQQ
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