| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1723 |
|---|
| Symbol | |
|---|
| ID | 5366606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1945041 |
|---|
| End bp | 1945673 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640804065 |
|---|
| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| Protein accession | YP_001340584 |
|---|
| Protein GI | 152995749 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00073696 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0239318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGA TGAACCCGAC TACCGGTCCT GTTGCAATCA CAAGTAATGG TCTTGTCCCA
ATGGTTATTG AGCAGACCGC TCGTGGAGAA AGGTCATTTG ATATTTACTC GCGCTTACTT
AAGGAGCGAG TGATCTTTTT GGTTGGTCAA GTTGAAGATC ACATGGCCAA TTTGGTTGTA
GCACAGTTGC TATTTTTAGA GTCAGAAAAT CCGGATAAAG ACATTCATTT GTATATCAAC
TCTCCGGGGG GCTCTGTTAC TGCTGGTATG TCTATTTATG ATACTATGCA ATTTATTAAG
CCAGATGTTA GTACTATGTG TATTGGCCAA GCGGCTAGTA TGGGTGCCTT ATTGTTAACG
GCGGGTGCAG CTGGTAAACG TTATTGTTTG CCTAATTCAC GCGTTATGAT TCACCAGCCA
TTGGGTGGTT ATCAAGGGCA GGCTTCTGAT ATTGAGATTC ACACTCGTGA AATCTTAAGT
ATCAAACATA AATTGAATGA AATTATTTCT TTTCATACTG GCAAGCCAAT TGAGCAGGTT
GCGCTTGATA CGGATCGTGA TAACTTCATG AATCCACAAA CAGCAAAAGA TTACGGTTTG
ATTGACGAAA TCTTGCAAAA ACGAACAGTT TAA
|
|---|
| Protein sequence | MNLMNPTTGP VAITSNGLVP MVIEQTARGE RSFDIYSRLL KERVIFLVGQ VEDHMANLVV
AQLLFLESEN PDKDIHLYIN SPGGSVTAGM SIYDTMQFIK PDVSTMCIGQ AASMGALLLT
AGAAGKRYCL PNSRVMIHQP LGGYQGQASD IEIHTREILS IKHKLNEIIS FHTGKPIEQV
ALDTDRDNFM NPQTAKDYGL IDEILQKRTV
|
|---|
| |