| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1680 |
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| Symbol | |
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| ID | 5366176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1897210 |
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| End bp | 1899543 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640804021 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001340541 |
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| Protein GI | 152995706 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTT TAAGAAACCA TGTGAAAAAT GGAAAAATGC ATTACGTCGT TTTTTGTTTT
GTTTTTTTAT GTGGAATGGC TACGAGCCTT GCTATTTATT TGGAAGAACG TAAGCATGTT
TACAGCGATC AAAAAGCTGT AGGGGAGCAC TTTACTGAAA AACTAAATGA TAGTTTGACG
CAATATATAA CGGGGGTATC TACCGCTGCT GCTCTTATTG AGACTAGCAA AGGGGAGGTA
ACTGCTGGCT ATTTTTCGCG TTTTGCTCAG AGAGTTATCA CTACTCAAGG CATTAATTTA
TATTTTGCTC AGTATGTACC TGCCAGTAAA AAAAGCGAAT ACGAAATGCA GAAACGTATT
TTGTTAGGTA ATTATAATTT TAGAATTTAT CCCGATGGTG ATAGGTCTGA GTACATGCCC
TTGACGTTAG GGTATCCAGA TAAATTTACT TATGGTTATG ACATTTTATC TTCGCAATAC
CGGAATCTTA GTTCGGTTAT TCAGGCTCGT AATTCCTCTT CTGTCACTTT GTCCGAGCCG
ACATTTTCGC CTTTTTCTGA TGTTAGTTTG AGTGCGGAGG CCGATACCTT CATTATCAGA
AAGCCAATTT ACTTATCTGT TGATGCGCGT TCTTATAAGT TAACAGACGA TATAGGTTTT
CATGGCATTA TCGGTGCGTT TTTTAAAGTA GATAGCCTGT TTAAAGAAGT TAACTCCTTG
GTTCGCCACG ATCTCTATTA CCGACTTGCC GATGTTTCTT CAGATAGTAT GCTTTGGTTT
GTCGACACGG CTGAACCTTC CTCATGGGAA GGTGTAAATT TTGATACGCA CTATCTTTCT
ATTGCTGGAC GTAAATGGCG AATTGATACT CGTTATACTG AAAACATTAT GACTCGAATA
CATTGGTTTT TAGTTATTGC TCCCTTATTT GTATTTGGTT TTTTTGCGCT ATTTTTAGCC
TATTATTCAC GTAAATTGTC CTTAACTTAT TTCTCTATGC TTGATTCAAT CAATAATCGT
ATCGAGATTG ACGAGCTGAC TGGGTTGTTA AGTCGTTATC AAATACAGCT TGAACTAAAT
GAATTAATCG TAAGCTGTCA GGAAAAAGAT AAGCAGTTAG CTGCGTTGAT TTTGGATTTA
GACCATTTCA AAACCATTAA TGATGCCTTT GGCCATGAAT TGGGGGATAA GTTACTGGTA
AATGTGTCTA AGCGATTAGC GTCTATTTTG CCTGATGATG CTGTCATTGG TTATTTAGGC
GGCGATGCTT TTCTAGTGTT GCTTGTACAG TCTGATGATC AGGGTGTGCC GGTGTTAGAT
GTCTTCGCAA AAGATTTGAT ACAAAAAGTG AGTCAGAGCT ATTTTGTGGA TGGACTAACG
CTTGATATTG GCTGTTCCAT TGGTGTCGCT ATGTATCCTG AGTTTGGTAC AGATGCGGTT
ACCTTAATTA AAAATGCCGA TATGGCTGTA TATCAAGCAA AAACAGCGGG GCGTGCTACC
TATCATTTTT ACGATGGCGA TATGGGGCGT CGGTTTGCGC GCAATGTGCG AATTGAAACT
CGGCTACGTC TAGCGTTGCA GAGCGGGAAT TTAGAGCTTC ACTTTCAGCC TAAAGTGGAC
CTTACAACAG AGCGTTGCGT AGGGATGGAG GCCTTGTTAC GTTGGAATGA TGAGGAGCTT
GGCATGGTTT CGCCCGCAGA ATTTGTTCCT ATTGCTGAGC AAACGGGCAT TATTCTACCT
CTGGGTGACT GGGTCTTCGA ACAAGCTTTT CGTCATATAT TAGAATGGCA AGCGCAAGGT
ATTACGGTGC CGCCTATCGC TATTAACTGT TCTGCTGCAC AGCTTAAAAG AATCGATTTT
TTACCTAAGT TATTGGCGTT ATTGGATAAA TATCAGGTCG ATCCGAGTCT TTTAGAAATT
GAAGTGACTG AATCAATTCT GATCGAAGAT GCGGAAAGAT GTGCCGAGCT TTTACGTCAA
CTTAGTCGTC TTGGAATGAA GTTGGCCATT GATGATTTTG GCACAGGTTA TTCGAGTTTA
GGCTACTTGA AAGATTTGCC ATTTCATTAT GTTAAAATAG ATCAAGTTTT TATTCGTAAT
ATCATTGAGG ACAAGAAGCA CGCGGCATTG ACTCATGCGA TAATTAGTTT GAGTCATGAT
TTAGGACTTA AAGTGATTGC AGAAGGTATT ACTGATATTC ATCAGCTAAT AATGTTGCAA
GATTTTGGCT GTGATATTGG TCAAGGTTAC TTATTCAGTA AGGCGTTAGG GGCAAACTCC
ATGGGGAGTG ATCCCATGAT AGTGGCGCTT AATGAACAGG GCTCTGAGGA TTAA
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| Protein sequence | MISLRNHVKN GKMHYVVFCF VFLCGMATSL AIYLEERKHV YSDQKAVGEH FTEKLNDSLT
QYITGVSTAA ALIETSKGEV TAGYFSRFAQ RVITTQGINL YFAQYVPASK KSEYEMQKRI
LLGNYNFRIY PDGDRSEYMP LTLGYPDKFT YGYDILSSQY RNLSSVIQAR NSSSVTLSEP
TFSPFSDVSL SAEADTFIIR KPIYLSVDAR SYKLTDDIGF HGIIGAFFKV DSLFKEVNSL
VRHDLYYRLA DVSSDSMLWF VDTAEPSSWE GVNFDTHYLS IAGRKWRIDT RYTENIMTRI
HWFLVIAPLF VFGFFALFLA YYSRKLSLTY FSMLDSINNR IEIDELTGLL SRYQIQLELN
ELIVSCQEKD KQLAALILDL DHFKTINDAF GHELGDKLLV NVSKRLASIL PDDAVIGYLG
GDAFLVLLVQ SDDQGVPVLD VFAKDLIQKV SQSYFVDGLT LDIGCSIGVA MYPEFGTDAV
TLIKNADMAV YQAKTAGRAT YHFYDGDMGR RFARNVRIET RLRLALQSGN LELHFQPKVD
LTTERCVGME ALLRWNDEEL GMVSPAEFVP IAEQTGIILP LGDWVFEQAF RHILEWQAQG
ITVPPIAINC SAAQLKRIDF LPKLLALLDK YQVDPSLLEI EVTESILIED AERCAELLRQ
LSRLGMKLAI DDFGTGYSSL GYLKDLPFHY VKIDQVFIRN IIEDKKHAAL THAIISLSHD
LGLKVIAEGI TDIHQLIMLQ DFGCDIGQGY LFSKALGANS MGSDPMIVAL NEQGSED
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