| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1478 |
|---|
| Symbol | |
|---|
| ID | 5365766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1658164 |
|---|
| End bp | 1659027 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640803822 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001340342 |
|---|
| Protein GI | 152995507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGA TGATTTGGGA CGATACGAAA GCTTTCTTGG CACTTGCCCG TTTTGGCACG
CTTACCATAG CTGCAAAATC TCTAGACATG GGAATTGCTA CGCTATCACG AAAAATAGAA
CGTCTTGAGC ACAGTCTACA AACACCGCTC TTTTTGCGTT TTCAAACAGG CTACCAACTG
ACGGATGAAG GCAAGAATCT ATTAAATAAA GCAGAGGCAA TGGAAGCTGC TGCTTTTACG
TTTACCAAGA GTGCGAAAAA GGAATCTCAA CTGATCGGAA GGGTCAAAGT CGCTACGGCT
GAAAACCTCG CCACCCACCT CATTATTCCA GCGCTAGGCC ATTTTCAGCA AACCTGCCCA
AACTTACACA TCGATATTGT CACCGACATT CATACAGCCA ATTTACATCG TCGAGATGCT
GACCTCGCCT TACGTATGGT GCGTCCAACC AATGGTAATG TCAGCTTCCA GCGTGTTGGC
ACGCTAGGCT ACGGACTCTA CTGTAGTACT CATTACCAAA ATGAACGCGA TGATGCTAAT
GACAACTTTA TCCAATGGGG AGACGGTTAC GAGCATTTGC CCGCAGCACG ATGGATAGCC
AGTCAATTAG TCGGGAAAGA GCCCATTCTC ACCACGACAT CAGTGGCAAC CCAAGTCAGT
GCTTGCCTAG CGGGAGTCGG CGTAGCGATA TTGCCACACC TAGTTGCGCG TCACACTGAA
CTCGTTTGCC TCGCTAACAT ACCAGAGATC AATCAAGAAA TTTATCTGGT TATCCAAACC
GATTTAACCC AATCAAAGCG CATTCGCGCT GTGGCGGATT TTCTTTCAGA GCTGGTAAAG
ACACATCAAG ATCGCCTTAA TTAG
|
|---|
| Protein sequence | MKEMIWDDTK AFLALARFGT LTIAAKSLDM GIATLSRKIE RLEHSLQTPL FLRFQTGYQL
TDEGKNLLNK AEAMEAAAFT FTKSAKKESQ LIGRVKVATA ENLATHLIIP ALGHFQQTCP
NLHIDIVTDI HTANLHRRDA DLALRMVRPT NGNVSFQRVG TLGYGLYCST HYQNERDDAN
DNFIQWGDGY EHLPAARWIA SQLVGKEPIL TTTSVATQVS ACLAGVGVAI LPHLVARHTE
LVCLANIPEI NQEIYLVIQT DLTQSKRIRA VADFLSELVK THQDRLN
|
|---|
| |