| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1303 |
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| Symbol | |
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| ID | 5367307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1457070 |
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| End bp | 1458161 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640803642 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_001340167 |
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| Protein GI | 152995332 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG AATGGCGATA TGCTTGGTCT AAACCAACTG TTACTGGGGA TTTAAAAACC
CATGTGCAAG ACTTTTATGT CGAAGAGCAG TTAGGTTTTG AACCTGATGG CAAAGGTGAG
TTCTGCTTTG TGTTTATTGA GAAGGAAGGA GTGAATACTG AATTCCTTGC TAAACGCTTG
GCTCAAATTG CTGGTATTGC TCCGAATAAA GTGACTTACA GTGGTGTGAA AGATCGTCAT
GCTTGTACTC GTCAGTGGTT CTGTTTACAT GTGTTGAATC AAGAACCAGA TTTAACGACC
ATTCAGGAAG CGTTTAGAGA ACCGGAGAAT GTTCGAGTAA TTGCACAGTT ACGTCACTCG
AAAAAGCTTC GTACCGGCGC GCATTTAGCG AATCGCTTTG TTATCCGTCT TCGCGATGTT
AATGGAGATC TAGACGAGTT AGAAGGGCGT TTGAATCTGA TAAAGCAAGG CGGTGTGCCC
AATTATTATG GTCCTCAGCG TTTTGGGATA AACGGTAATA ATTTGCACTA CGGCAAAGAT
TTTGTCCTAA AAGGGCGGCA AAGTCGCCGC AAATTATCAA AGACAGAATC CTTTTGGCTA
TCGGCTATTC GTTCTTGGTG TTTCAATGAG GCATTAAGCG ATCAAGTTGA AAACGGTATG
TGGATGCGTT TATGTGATGG TGATATCGCT CAGTTTCAGC ATAAAGATGA GCAGTTCCGT
GTAAAAGAAG TCGGTGCTTT GATGCACTTA AGTGTAATGC GAGGCAGTAT AAGCCCCGTA
TTGCCTATGA TTAGTGAGGG TTGGGAGGCT GGCACCGGCC ATCAGCGCGA GCGAGTGATG
AAAGACTCTT TGGCGGAAAG TATGGACGTG GTTGATGCTT TGATTGCCTT TGATCTTTCT
AGAGATAGCC GGTTGGCGCG CCTTGTGCCG ATGAATATGG CGTGGGAATT GCTAAGAGAG
AAAGAAGGAA ATGCGCAATT GATCGTTGAA TTTTCCTTAC CAAAAGGGTG TTTTGCGACC
AGTCTGTTGC GCGAAATGAT AGATTATACG GATAAGTCTG CAGAGAAATA CCATGAGAAT
ATTGATCGCT AA
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| Protein sequence | MNTEWRYAWS KPTVTGDLKT HVQDFYVEEQ LGFEPDGKGE FCFVFIEKEG VNTEFLAKRL
AQIAGIAPNK VTYSGVKDRH ACTRQWFCLH VLNQEPDLTT IQEAFREPEN VRVIAQLRHS
KKLRTGAHLA NRFVIRLRDV NGDLDELEGR LNLIKQGGVP NYYGPQRFGI NGNNLHYGKD
FVLKGRQSRR KLSKTESFWL SAIRSWCFNE ALSDQVENGM WMRLCDGDIA QFQHKDEQFR
VKEVGALMHL SVMRGSISPV LPMISEGWEA GTGHQRERVM KDSLAESMDV VDALIAFDLS
RDSRLARLVP MNMAWELLRE KEGNAQLIVE FSLPKGCFAT SLLREMIDYT DKSAEKYHEN
IDR
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