| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0952 |
|---|
| Symbol | |
|---|
| ID | 5366213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1049515 |
|---|
| End bp | 1050222 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640803285 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001339818 |
|---|
| Protein GI | 152994983 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAA TTAACAAAGT TGATCAACTT TACGGCGGCA CGCAGATTCT TTGGGGCTTG
GATTTAGACA TAGTTCCCGG CTCTATAACT TGCATCATGG GACGCAACGG CGTGGGCAAA
ACCACCTTAC TAAAAGCCAT CATGGGCTTG TTGCCGATCA CCAAAGGCGA GATCACCATG
GAAGGCGAAA TACTGAATAA ACAAAGTGCC GAAAAACGCG CATATTCGGG AATTGGTTAT
GTGCCTCAGG GGCGAGATAT TTTTCCCATG CTCACGGTAG AAGAAAACCT GCGTATTGGT
TTGCCTGTGC GTGGTAAGCG CACGAAAGAC TCTCCAAAAG AAATTCCAGA GAAAATCTTT
GAGCTTTTTC CGGTATTGAA AGACATGTTA CATCGTCGTG GTGGTGATTT ATCAGGTGGC
CAGCAACAGC AGCTGGCGAT TGGCCGTGCT TTGGTATTAG AGCCAAAAGT CTTGATTTTG
GATGAACCTA ACGAAGGTAT TCAGCCGAAC ATAGTGAAGC AAATCGGCGA TGTGATTTTA
AAGCTGAACG AAGAAGAAGG ATTAACCGTT ATCTTGGTGG AACAAAAGCT TGGCTTCGCT
CGTCGCGTCG GGAAAGAATT TCGTCTGATG GAAAAGGGAC GCATTGTGGC GGCGGATAAA
ATGGAAAATC TCAACGACAC CCTGATAAAA CAATACTTGG CGGTCTGA
|
|---|
| Protein sequence | MISINKVDQL YGGTQILWGL DLDIVPGSIT CIMGRNGVGK TTLLKAIMGL LPITKGEITM
EGEILNKQSA EKRAYSGIGY VPQGRDIFPM LTVEENLRIG LPVRGKRTKD SPKEIPEKIF
ELFPVLKDML HRRGGDLSGG QQQQLAIGRA LVLEPKVLIL DEPNEGIQPN IVKQIGDVIL
KLNEEEGLTV ILVEQKLGFA RRVGKEFRLM EKGRIVAADK MENLNDTLIK QYLAV
|
|---|
| |