| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0405 |
|---|
| Symbol | |
|---|
| ID | 5368594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 467000 |
|---|
| End bp | 468016 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640802743 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_001339278 |
|---|
| Protein GI | 152994443 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA ACCAACGAGT TATTGGCAGC TCTCAAGCTC TGGCCGACAC GCTTGATCAT
GCCTCGATTC TGGCGGAAAT TAATCGGCCT ATTTTAATCT GTGGTGAACG AGGCAGCGGC
AAAGAGCTCA TCGCAGAGCG ATTGCATTAT TTATCCCCTC GTTGGGATCA GCCTTTTATT
AGCATCAACT GCGCAGCCAT TAGTGACAGC TTGATGGAAA GTGAATTGTT TGGTCATGAA
GCAGGGGCTT TTACTGGCGC AACCAAGACT TACCAAGGCA GATTTGAGCG TGCAGACGGC
GGCACCTTGT TTCTTGACGA ACTAGGCACC ATGTCTCTTA GGGTACAGGA AAAGCTACTT
CGGCTTATTG AATATGGCGA GTTCGAACGC CTCGGCAGTG CTAAAACTCA ACGAGTTAAC
GTTCGAATTG TCGCGGCAAC TAACGCAAAT TTACCTTCTC TTAGCAAGCA AGGCGAATTT
CGTGCAGACC TACTTGACCG CCTTACCTTT GATGTCATTC AAGTTCCTCC ATTACGAGAT
AGAAAAGAAG ACATCGAAGA ATTGGCCAAT TTTTTTGCGA TGAAACTTAG CACGGAACTT
GGCTGGGAAT ATTTCCAAGG GTTTAGCCCT AAAGCCCTAA CGTCATTAAA AAATTATGAT
TGGCCAGGCA ACATTCGAGA ACTTAAAAAC GTTGTAGAGC GCTCCGTTTA TCGATGGGGC
TTTCAAGCCG ATCCCGTTGA GAAAATCGTA ATTAATCCTT TTACTCATGC AAATGAAGAA
GCAAGCGACA GCCTCATCAA TAAACAAGCC GCACAGGCAC AGGCAAATAC AATAGATTCA
AAACCGTCTG GCTTTTCCCT TAATTCCTCT TTGAGCTTGA AAGAGCAGAC CTTTCAGCTG
CAACAACACT TAATTCAGCA AGCTCTTAAT GAAAATAAAC ACAACCAGCG ACTCGCCGCA
CAGTCACTGG GACTCACTTA TGATCAATTT AGAGGTTTGC TCAAGAAGCT AAAATAG
|
|---|
| Protein sequence | MNNNQRVIGS SQALADTLDH ASILAEINRP ILICGERGSG KELIAERLHY LSPRWDQPFI
SINCAAISDS LMESELFGHE AGAFTGATKT YQGRFERADG GTLFLDELGT MSLRVQEKLL
RLIEYGEFER LGSAKTQRVN VRIVAATNAN LPSLSKQGEF RADLLDRLTF DVIQVPPLRD
RKEDIEELAN FFAMKLSTEL GWEYFQGFSP KALTSLKNYD WPGNIRELKN VVERSVYRWG
FQADPVEKIV INPFTHANEE ASDSLINKQA AQAQANTIDS KPSGFSLNSS LSLKEQTFQL
QQHLIQQALN ENKHNQRLAA QSLGLTYDQF RGLLKKLK
|
|---|
| |