Gene Mmcs_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5543 
Symbol 
ID4114411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp112930 
End bp114777 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content68% 
IMG OID638034698 
Producthypothetical protein 
Protein accessionYP_642699 
Protein GI108802503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0512688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCG ACGCGTCCAG GGCTGGCGCC CACCCCGAGC GGCTGCAGCG CTGCAGCGAA 
TGGATCCGCG CGTGGAGTCC CGCGGTGCTG CTGAGGTGGT GCGGGCGGCA TCGCCTGATC
ACCACGCTGG CCGCCGCTGG GCTGATGCTG CTGATACTCG GAGCGGCCCG CGCCTGGGCC
GATCCCGGCA CCGGCTCTGC CTCCGACGGC GGCAACGTGC TCATTTCCTG GATGGGCATC
AAGGACTCCG ACGGGGTGCC GGTATCGAAG TATACCCTGA CGCTCAACCA GGGCGGCTGG
GACGACCCGG CGTCGACGAT GTTCGCCAAG GTCGCCTCGC TGTCCTACGA GGTCTACCTG
TGTGTCATCG CCACTGCGCT GTGGCTGATC AAGTTCGTTC TGGACTTCCA GTGGATGAGC
CTATTCACCG TTCCCTTCCA GACGATCGGG CGCGGCGTCG ACGAAGCCAT GGATCGCTTC
GGGTTGGCGG CGACCGCTGT GGCCGTGCTC GCGATCGTTG TGGTGTGCAC CGTGCTGGCC
GGCCGGACGG CCAAAGCGTT CTCGAACATC GCCATGGGCA TACTCATGAT CGGCGTCGCC
GCCACGATTT TCGCCAATCC GCTGGCCGAG CTGGTGGGCC CGGACGGGCT GCTGGCCAAG
GGCCGTGACA CCGGCCTGGA GATCGCTACC TCGGTGTCGG ACGGATCGAT GAGCCAGCAG
GGCGACGGCG CCAACATCGA CGACATGGTG GGCCGGCTGG CCGACCGCTT CCTGCGCTCA
CCGACCCAGA TGATCAATTT CGGCGTCGTC AGTGACTCGG TGTCCCGCAA GTGCCGGGAA
GCGTGGTCCA AAGGCATCAA CGACGAGCGC GGCGACAAGC TCAAAGACGA CATCAAAGGG
TGCGACTCGG ACAAAGGCGG GGCCATGCAC CAGAAGTCGA TGGGCAACCC CGTCGCGATG
CTCGTGCCGA TCATCATGTG CGGGCTGCTG TCGCTGTTCC TGGTGGCGTT CGCGTGCTAC
TTCGTCTGGC ACGTGGTCAA AGCCGCCGTG CAAGCCATGC TCTTCGCCTC GCTGGCGCCA
CCGGCCTTCG CGATCGGCGT CATCCCCGGC GGCCCACAAA CATTCGCCTG GAAAACCGTC
CTGGACTGCG CGATGGCCTA CGCCGCGATG GTGATCTTCA CCGCCGCATT CGGGGCCTAC
AACGTCATCC TCGATCAGGT CTTCAAAGAG TCCACCAATC CCATCCAGTC GATCTTCTTG
ACCGCGTTGG TGCTCGCGTT CGGGTTCGCG GTGTTCGGGC CACTGCGCCG CATGTTCGAC
CGTCAACGCG ACGTAATGGC CGCCAAGCTC GGCGGCGGCG CCGCCGGCGG CCGCGGCGGC
GCCGGCCGGA TGTCGCAGCT CGCCGATATG GCGCGCCTCA AGAACGAAGC CGCCGAGCAG
TTCGGCTGGA ACACCATGCG CAACGGGAAA CGCAATCCCG GCCGCATCGA GCACGAAGCC
GACTCGTCGA GCAGCTCCGG AGGCAGCGGA GGCGCCGGCC CCGACGGCGG CGGCGACGAT
GGCGGCGGAC CGTCAGGCCC GGTGTCGGTT GGTGACCCGG CCGCCGGAGC GCCCACCGGC
GGCCACGCTG CCGGGCCGGA CAACACCTCC GGCAACTCCG ATCCGGCCGA GGCCGCACCG
CGCACCGGAA GCCACCGGGA CCCGCAGCCC GAACCGGCCG GCGCGCGCTC GGACAACAGC
CGCACCAAGG ACACCCTCGA CGCGGCGATG CGGATCTACC GCGCCAGCCG CGGCGACTTC
GGCGCTGCAG GCGGCGGCGG ACGGCACGCC ATGTCCGAGG CTGCCTGA
 
Protein sequence
MIVDASRAGA HPERLQRCSE WIRAWSPAVL LRWCGRHRLI TTLAAAGLML LILGAARAWA 
DPGTGSASDG GNVLISWMGI KDSDGVPVSK YTLTLNQGGW DDPASTMFAK VASLSYEVYL
CVIATALWLI KFVLDFQWMS LFTVPFQTIG RGVDEAMDRF GLAATAVAVL AIVVVCTVLA
GRTAKAFSNI AMGILMIGVA ATIFANPLAE LVGPDGLLAK GRDTGLEIAT SVSDGSMSQQ
GDGANIDDMV GRLADRFLRS PTQMINFGVV SDSVSRKCRE AWSKGINDER GDKLKDDIKG
CDSDKGGAMH QKSMGNPVAM LVPIIMCGLL SLFLVAFACY FVWHVVKAAV QAMLFASLAP
PAFAIGVIPG GPQTFAWKTV LDCAMAYAAM VIFTAAFGAY NVILDQVFKE STNPIQSIFL
TALVLAFGFA VFGPLRRMFD RQRDVMAAKL GGGAAGGRGG AGRMSQLADM ARLKNEAAEQ
FGWNTMRNGK RNPGRIEHEA DSSSSSGGSG GAGPDGGGDD GGGPSGPVSV GDPAAGAPTG
GHAAGPDNTS GNSDPAEAAP RTGSHRDPQP EPAGARSDNS RTKDTLDAAM RIYRASRGDF
GAAGGGGRHA MSEAA