Gene Mmcs_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5538 
Symbol 
ID4114406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp107935 
End bp108948 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID638034693 
Producthypothetical protein 
Protein accessionYP_642694 
Protein GI108802498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.188959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC GCCCGACCCA GCGCCTGATC GACTCCCTGT TCCTGCGCAT CAGCGGTGGG 
GACACCATCC GCGCCGACGA ACGCCGCGCA CGGGCAACGC AGTCGATCCT CGCCTTCATC
ATGGTCAGCT ACATCCCGCT GATCGGAGTC GTGGCACTGC TGGTGGTCAA CCGCCCTCAG
CCCGTCAACA CGGTTGTCGA GCGCGACCAG ATGACGGCCG TCGAAGCCTA TGCAACTCAC
TACGTCGACA CCTACCTCAA AGACCCGTCC AACAGCGCCG CCATCAAGCA GTTCTACGAC
GGCGATGTCC CCGCCTCCGC GCTGCCGGCC GGTGGCCGCG CCTTGCGCGC TTCGTCGGCC
CTTCCCGGTG TGAATGCCGA CGGTTTTCAG ACCTATTCCG TGGTTGTCGA CGCCGAGATA
CCCAAGGCGG CTAACTCGCA GTCAATGGTG TTCGTTCGCC TGCAGGTCGA CATCTCAGCC
GACCTCAAGA ATCGCTTCCG CGCGTTCACG TTGCCGCACG CCCGCCCGGA CCGTCCGTCC
GGTGTTCCGG TGGAGTTGGC GACGCAGACA TTGGTGGCCG AGGACCGCCC GGTGTATCGC
ACGGTGTCGG GCTTCCTGAG CGCGATGCTC ACCGGTCAAG GCGACCTGGT GCCGTACATC
TCGGCAGGGT CGGGTTTGAC CGCAGCGCAA CCGCCCCGAT TCACCACCAT GGCGATCGAG
CGGGTGCAGA CCAATTCCGA CCTCGCAGTC GGCCAGGACG TGCCACCCAA AGCCGACAAC
GTAGAGGTCA CTGTTCGCGC TGTCATGCAG ACCGCCAGTG GCGTGCTGAT GCCGATGGAT
TTCCCGTTAG TGATGTCGGT CGCCGGTGGT CACTGGCAGG TCGACCGCAT CAACGACTCC
CCCAGCGTCA TCGCCCCCGA TAGCGAGACC ACGAACGCCC CGTCAACCAC TCCGACAACC
ACCACGACAA CCGCCGTACC GACCTACCCG ACCACCACCG TTGAAGGGAA CTAA
 
Protein sequence
MLSRPTQRLI DSLFLRISGG DTIRADERRA RATQSILAFI MVSYIPLIGV VALLVVNRPQ 
PVNTVVERDQ MTAVEAYATH YVDTYLKDPS NSAAIKQFYD GDVPASALPA GGRALRASSA
LPGVNADGFQ TYSVVVDAEI PKAANSQSMV FVRLQVDISA DLKNRFRAFT LPHARPDRPS
GVPVELATQT LVAEDRPVYR TVSGFLSAML TGQGDLVPYI SAGSGLTAAQ PPRFTTMAIE
RVQTNSDLAV GQDVPPKADN VEVTVRAVMQ TASGVLMPMD FPLVMSVAGG HWQVDRINDS
PSVIAPDSET TNAPSTTPTT TTTTAVPTYP TTTVEGN