| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5399 |
|---|
| Symbol | |
|---|
| ID | 4114225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5688932 |
|---|
| End bp | 5691361 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638034554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642555 |
|---|
| Protein GI | 108802358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCGC CACGCATGAC GACGGCGGTG CCGCGTCTGC TGGCCGCACT GGTCCTGTTG
CTGCTGACCG CCATCTCGAC CGTCCTTCCG CATGCCGCCG CCGGGGAGCC CGGCGCCGCC
GCGTTCCTGC AGTTGCGCAT CGACCGCGTG ACCCCCGACG TCGTCACCAC GGCCAGCGAT
CCGGTGGTCA CGGTGTCCGG GGTGGTGCGC AATGTCGGGG ACCGCACGGT CCGCGATGTG
GTGCTGCGTC TCGAACACGC GCCGGCGGTC GACTCGTCGT CGGGGCTGCG CACCAACCTG
ACCGGCAACC TGGATCAGTT CGAGCCGGTC GCCGACTTCG TCACCGTCGC CCCCGAACTC
GATCGCGGTA AAGAGGTGCC GTTCACCTTC GCCTATCCGA TTCGCGCCGC GGACGGGCCG
TCGCTGCGCA TCGAGTCGCC CGGCGTGTAT CCGCTGATGG TCAACGTCAA CGGCACACCG
GACTACGGGG CGCCGGCCCG GCTCGACGAC GCGCGTTTCC TGCTGCCGGT GCTGGGCGTG
CCGTCCGAAC CCGGCGCCGA GTCGGCCGCC GAGACACTGA CCTCCGTCGT ACCTCCCGAC
ACGTCGAAAC CCGTGCGGCT GACCATGTTC TGGCCCCTTG CCGACAAACC CCGGCTGGCC
GCGGGCATCC CGGGCGGCAC GACACCGGTG CGGTTGATCG ACGACGACCT CGCGGCGTCG
CTGGCGCCCG GCGGCCGGCT GGAGACGCTG CTGGCCGCGG TGGACTTCGC CACCGGCCCG
ACCGTGGACC AGGGCGGTGA GCTCGGCCGA GCACTGTGCC TGGCGGTCGA CCCGGACCTG
CTGGTGACGG TCAACGCGAT GACGGCCGGA TACGCCGTGA ACGACGGACC CGACGCCGGG
CCGACCACGC CGACCCGCCC CGGCACCGGA CAGGAAGCGG CCGTCGGCTG GCTCAACCGG
CTCAAGGTGC TCGCCCGACG GATGTGCGTG ACGGCCACGC CGTACGCCCA GGCGGATCTC
GACGCGCTGC AGCGGGTGGG CGATCCGCGC CTCGGCGCGA TCGCCACCAC CGGCGCCGCC
GACATCGTCG ACCAGATCCT CGGCGTCCCC TCGACCCGCG GTGTCACGCT GGTCGGCGAC
GGTCCGCTCA CCGGGGCGGC GGCGCAGCTG CTGTCCACGC AGGGGCGGAC GGTGGCGGTC
ACCGCGGCCA CCCTCACGGC CCGCGACGAC GCGACCGGCC TCGGCTCGAC CGCCGACCTG
GCCCCCGTGC GGTACTCCCC CAACCTCGTC GCGATGCCGT TCGACCCGAC GATCGGTGCG
GCACTCGCCG GGGCCGGCGC CGAACCCGCG GCGCCGACCT ACCTCGACCC GTCGCTGGAC
GTCCCGCTGC GGCACGACTC GGCGGTGGCC CGGCGCCAGA ACGCGATCGG CTCCCTGTTG
TGGCGCGGTC TGCAACCCGA CACCGGCCCG CGTACCCAGA TCGTGGTGCC GCCACTGGTG
TGGAGCCCGC GGCCCGACGA CGCCCAGGCC GTCCTGACCT CGATGGGCAC CGCGATCAGG
GCCGGCCTCG CCCTCCCCCG ACCGCTGCGT GAGGTGATCG CCGAGGGCGA TGCCGTACCG
CCGCAGCCCG ATGCCGGGTG GCCGGCCGAC GACATCGGCA ACCCGCGCGG CCGCATCGAC
GACGCGGTGA CGTCCGGGAT CGCCGCCACG AACGGACGGC TCTCGGGCCT GACCGCGGCC
CTCGGCGTCG ACGAACGCAC CGGGCTGACC GGGATCGGGT ACACCGCGCC GCTGCGTGAG
GACATGCTGC GCGCGCTGAG CCAGTCGGTG CCGCCGCCCG CCCGCGACGG ATTGGCCCGG
CAGCGCCTCG CGGTGGTCAC CGACACCGTC GGCGACATGT TCGGCGCGGT GCGGATCATG
AACCCCGGTG GCGCGTACAC CCTGGCCACC GAGCGCAGCC CGCTGCCGCT GGCGCTGCGC
AACGATCTGC CGGTGCCGAT CCGGGTGCGG CTGGCCGTCG ACGCACCCCC GGGGATGACG
GTCGACGACC TGGGCGAGAT CAGCCTGCCG CCCGGATATC TGCCGCTGCG GGTTCCGATC
GAGGTGCACT TCACCCAGCG GGTCGCCGTC GACGTGGCGC TGCGCACCGC CGAGGGGTTG
CCGCTCGGTG AACCGGTGCG GCTGTCGGTG CACTCCAACG CGTACGGCAA AGTGCTGTTC
ATCATCACCA TGAGCGCCGG CGCGGTGCTG GTGCTGCTGG CCGGCCGCCG GCTGTGGCAC
CGCTTCCGCG GCCAACCCGA CCCGGCCGAC CTCGACCGGC CGAAACGCGC GGTGGCCGAC
CGGACCCACG AGGCGCATGC GCCTACCGAC CCGCTCGACA CCGCCCTCCG GTACGCCCCT
GGCGACCAAC CCGTCGGCGA CCAGAAATGA
|
|---|
| Protein sequence | MAAPRMTTAV PRLLAALVLL LLTAISTVLP HAAAGEPGAA AFLQLRIDRV TPDVVTTASD
PVVTVSGVVR NVGDRTVRDV VLRLEHAPAV DSSSGLRTNL TGNLDQFEPV ADFVTVAPEL
DRGKEVPFTF AYPIRAADGP SLRIESPGVY PLMVNVNGTP DYGAPARLDD ARFLLPVLGV
PSEPGAESAA ETLTSVVPPD TSKPVRLTMF WPLADKPRLA AGIPGGTTPV RLIDDDLAAS
LAPGGRLETL LAAVDFATGP TVDQGGELGR ALCLAVDPDL LVTVNAMTAG YAVNDGPDAG
PTTPTRPGTG QEAAVGWLNR LKVLARRMCV TATPYAQADL DALQRVGDPR LGAIATTGAA
DIVDQILGVP STRGVTLVGD GPLTGAAAQL LSTQGRTVAV TAATLTARDD ATGLGSTADL
APVRYSPNLV AMPFDPTIGA ALAGAGAEPA APTYLDPSLD VPLRHDSAVA RRQNAIGSLL
WRGLQPDTGP RTQIVVPPLV WSPRPDDAQA VLTSMGTAIR AGLALPRPLR EVIAEGDAVP
PQPDAGWPAD DIGNPRGRID DAVTSGIAAT NGRLSGLTAA LGVDERTGLT GIGYTAPLRE
DMLRALSQSV PPPARDGLAR QRLAVVTDTV GDMFGAVRIM NPGGAYTLAT ERSPLPLALR
NDLPVPIRVR LAVDAPPGMT VDDLGEISLP PGYLPLRVPI EVHFTQRVAV DVALRTAEGL
PLGEPVRLSV HSNAYGKVLF IITMSAGAVL VLLAGRRLWH RFRGQPDPAD LDRPKRAVAD
RTHEAHAPTD PLDTALRYAP GDQPVGDQK
|
|---|
| |