| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5277 |
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| Symbol | |
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| ID | 4114104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 5564466 |
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| End bp | 5566826 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638034433 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_642434 |
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| Protein GI | 108802237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.337577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG CGTACGACCC GCCGCTGGCG GGCATCCGGA TCCTCGACCT GTCGTCGGGT
CCGATGACCG CGATCGGGCG CCTGCTGGCC GATCTCGGCG CCCACGTGAC CGCGGTCGGG
TTGGCCGGCG CGACCGCCCA CGCCGCGGGC GGCCCGGTGT CCCTGGCGAC GGCGATCAAC
CGGCGGGGTG TGGCGGCTGT CGACATCGAC ACCTCCACCC CGGCGGGACG GCAGCAGTGG
ACCGATCTGC TCGGCGCCGC CGACGTCCTG ATCGAGGACA CCCGGCCCGG TTCGTCGGCC
GAACGCCTGC TCGCGGTCCA CGAGCTCCGC ACCGCCCACC CCGGGCTGAT CGTGTTGTCG
CTCAGCGACT TCGGACGCGA CTCCGACTTC AGCGGCTGGC AGGCCACCAC GCCGGTGCTG
CACGCCCTCA CGAGCGAGCT GTCCCGGTCG GGCATCCCGG GGCGGGCGCC GCTGGTGCCG
CCGGGTGAGC AGTTGCCCTA CCACGTCGCG GCGGCGCAGG CCGGTGTCGC AGTGCTCGCC
GTGCTGCTCG ACCGGCTCCG TACCGGGATC GGCGACCGCA TCGACTTCGC GATCCTCGAG
GGTGCGATGC AGGCGCTCGA CCCGCCGTTC GGGACCATGG GCACCGCGTC GGCGGGGGTG
CCGACGGCTC AGCAGCAACG CAATTGGGAC GCCGAGCGGC TGCGCTATCC GATCGTCCCC
TGCCAGGACG GTTACATCCG CATCTGCCTG CTGGCGAAAC GGCAGTGGCA CGGCATGTTC
GAGTGGATGG GCCGGCCCGA GGAGTTCGCC GATCCGAAGT TCGAGGGACT GCTGGACCGG
CTGACCTCGA TCCCGCTCTG GGCGGCCATC GAGGCCTTCT GCGCCGACAA GACGCGCAAC
GAGTTGGAAC ATGAGGGGCA ACGGCACGGC GTGCCGACCG CCGCGGTGCT CAGCCTGACC
GAGGCGTTGG CCACCGAACA GGTCGTCGCC CGCGGGTTCT TCGGTGACAC CGAACTCGCC
CCCGGGCTCG TCGCCCCCGT CCCTCGCGGC GTCGTCGAGA TCGACGGGTG CCGCGCAAGC
GCCGGCACCG CCCCCGACCC CGGTGCGCCC ACCCTGCAGG GTGCGCCGGT CCTCGAGCAG
CGCCCGAGAA CCGACCAGGG TCTTCCGCTG GAAGGTCTGC GCGTACTCGA CCTCGGCGTG
ATCGTCGTCG GCGCCGACAC CGGGCGACTG TTCGGCGATC TCGGCGCCGA CGTCATCAAG
ATCGAGAACG CGGCGTTCCC CGACGGGATG CGCCCGGGCC GCAGGCCCAT GAACGCGAGC
TTCGCCGGCG GACACCGGAA CAAGCGGGCG ATCGGCATCG ACCTGCGCTC CGCCGAGGGC
CGCGAACTGG CGCACCGACT GGTGCGTGAG GCCGACGTCG TGCTGACCAA CTTCAAACCG
GGGGTCGCGG CCGCCCTGGC GATGGACTAC GACACGCTGA AGTCGGTGAA CCCCGGCATC
GTCGTGGTGG ACAGTTCGGC GTTCGGCCCG ACCGGCCCGT GGGCGCAGCG GCTCGGCTAC
GGCCCGCTGG TCCGCGCCGC AGCCGGCTTC ACCAAGCAGT GGGTCTACCC GTCGGATCCG
GACGAGTTCT GCGACACCGT GACCGTCTAT CCCGACCACG TATCGGCCCG CATCGGCGTG
CTGGCCGCGC TCAGCCTGCT GTTGCGCCGC GAACGCACCG GACTCGGCGG GTCGGCCAGC
ATCGCGCAGT CCGAGGTCAT GCTCAGTCAC CTCGCCGCCG AGATCGCCGG CGAGGCGCTG
ATCCGCGCCG GACACCAACG CTCCGACGCG CCGGACCACG ACGCCCCGTG GGGGCTGTTC
CGCGCCGACG GCGACGACGC GTGGGTGGCG GTCACCGTCC GCGACGACGC CGACTGGCAG
GCGCTGTGCC GGGTGCTCGG CCGCCAGGAC CTGGCCGGCG ATCCGGAGCT GGGCGACCGG
ACCGGGCGGG ATCGCAACCG CACGCGCATC GACGGGGCCG TGACCGACTG GACGGTCCGC
CACTCCCCCG GCGACGCCAT GGATCTGCTG CAGGCGGCCG GTGTGCCCGC GGGCGCCGTC
ATGCACGCCG CCGAGCTGCC CGGCTGGGAG TTCTACGCGC AGCGCCGCGC CTTCCGCGAG
GAGCTGCATC CCCACGGCCG GGAACCGTAC GTGCTGGAGA ACGCCCAGCT GCACTCCGAG
CGGATCGCGG ACCCGCCGCT GGGGCAGGCG CCGCTGCTCG GTGAGCACAC CGTCGAGATC
GCGACGACGC TGCTGGGACT GGACGAGGCG GCCGTGGCGG ATCTCGTCGA GCGCGGCGTG
CTGCAGACGC ATCGGCTCTG A
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| Protein sequence | MSDAYDPPLA GIRILDLSSG PMTAIGRLLA DLGAHVTAVG LAGATAHAAG GPVSLATAIN
RRGVAAVDID TSTPAGRQQW TDLLGAADVL IEDTRPGSSA ERLLAVHELR TAHPGLIVLS
LSDFGRDSDF SGWQATTPVL HALTSELSRS GIPGRAPLVP PGEQLPYHVA AAQAGVAVLA
VLLDRLRTGI GDRIDFAILE GAMQALDPPF GTMGTASAGV PTAQQQRNWD AERLRYPIVP
CQDGYIRICL LAKRQWHGMF EWMGRPEEFA DPKFEGLLDR LTSIPLWAAI EAFCADKTRN
ELEHEGQRHG VPTAAVLSLT EALATEQVVA RGFFGDTELA PGLVAPVPRG VVEIDGCRAS
AGTAPDPGAP TLQGAPVLEQ RPRTDQGLPL EGLRVLDLGV IVVGADTGRL FGDLGADVIK
IENAAFPDGM RPGRRPMNAS FAGGHRNKRA IGIDLRSAEG RELAHRLVRE ADVVLTNFKP
GVAAALAMDY DTLKSVNPGI VVVDSSAFGP TGPWAQRLGY GPLVRAAAGF TKQWVYPSDP
DEFCDTVTVY PDHVSARIGV LAALSLLLRR ERTGLGGSAS IAQSEVMLSH LAAEIAGEAL
IRAGHQRSDA PDHDAPWGLF RADGDDAWVA VTVRDDADWQ ALCRVLGRQD LAGDPELGDR
TGRDRNRTRI DGAVTDWTVR HSPGDAMDLL QAAGVPAGAV MHAAELPGWE FYAQRRAFRE
ELHPHGREPY VLENAQLHSE RIADPPLGQA PLLGEHTVEI ATTLLGLDEA AVADLVERGV
LQTHRL
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