Gene Mmcs_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5170 
Symbol 
ID4113999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5458143 
End bp5458730 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID638034328 
ProductTetR family transcriptional regulator 
Protein accessionYP_642330 
Protein GI108802133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACTC CGCGCAGTCG CCGCTCGGAC GCGTTCGCCA ACGTCCACCG CATCGTCGCC 
GCCGCCCGCG AGGTGTTCGG CCGCGACGGC GTCAACGCGA CGCTGAGCCA GGTGGCCGAA 
GCCGCCGGCG TCGCCAACGC CACGCTCTAC CGTCACTTCC CGAACCGTCG CGCCCTGGCC 
GCCGCCGTCT ACGAGGACAT CGTCGTCACC GACATCAAAC CGGCGATCCT CGCACTGGGC 
CGCGATGCCC CACGCGCAGC GTTCATCGAC GCCCTCGCCC ACCTCGAGGA CGTCATGTTC 
CGCCAGCGTC CGCTGCTGAC CTCGATCGGT GACCTCGCCG ACCTCACCGC ACAGTTGTTC 
ACGCGCGACC GCGAGCAGTT CGACGACATG ATCATGCAGG CGCAGGCGAC GGGTGCGCTG 
CGGCCCGACC TCACCGCCGA CGACGTGGCG ACGTTCGTGG CGATGGTGAC CACCGCGTCG 
GTCGCGATGA ACCAGCCACG GCCGGTGCGG CGCCGCTACC TCAGCCTGAT GTTCGATGCG 
CTCAATCCCG CTGCGGCCGA GCCACTTACG ACACCCGACC ACCGCTGA
 
Protein sequence
MVTPRSRRSD AFANVHRIVA AAREVFGRDG VNATLSQVAE AAGVANATLY RHFPNRRALA 
AAVYEDIVVT DIKPAILALG RDAPRAAFID ALAHLEDVMF RQRPLLTSIG DLADLTAQLF 
TRDREQFDDM IMQAQATGAL RPDLTADDVA TFVAMVTTAS VAMNQPRPVR RRYLSLMFDA 
LNPAAAEPLT TPDHR