Gene Mmcs_4932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4932 
Symbol 
ID4113761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5222277 
End bp5223047 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID638034086 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_642092 
Protein GI108801895 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACA GGTTTTCGAT GGAGGGACGG GTCGCGGTCA TCACCGGCGG CGGCACCGGT 
ATCGGACGGG CATCGGCGCT GGTGCTGGCC GAGCGCGGTG CCGATGTCGT GCTGGCCGGA
CGGCGGGAGG AGCCGCTGAA GGCCACGGCC GCCGACGTAG AAGCCCTCGG TCGCCGCGCC
ATCGCGGTAC CCACGGACGT GACGAAGGCC GATCAGTGCC AGGCTCTGGT CGACGCGGCG
CTCGGTGAGT TCGGCCGGTT GGACGTGCTG CTGAACAACG CCGGCGGCGG TGAGACGAAG
TCGCTGATGA AGTGGACCGA TGAGGAATGG CATGAGGTGC TGGAGCTGAA CCTGTCCAGC
GCCTGGTATC TCTCGCGTGC GGCGGCCAAA CCCATGATCG CCCAGGGCAA GGGTGCGATC
GTCAACATCT CCTCGGGCGC CAGCCTGTTG GCCATGCCGC AGGCGCCGGT GTACGCCGCG
GCCAAGGCGG GGCTCAACAA CCTGACCGGG TCCATGGCGG CCGCGTGGAC CAGGAAGGGC
GTGCGGGTCA ACTGCATCGC CTGTGGCGCC ATCCGCACCC CCGGACTGGA GGCCGATGCG
AAGCGTCAGG GTTTCGACAT CGACATGATC GGCCAGACCA ACGGATCGGG TCGCATCGCC
GAGGCCGACG AGATCGGCTA CGGCGTGCTG TTCTTCGCCT CCGACGCCTC GAGTTACTGC
TCCGGGCAGA CGCTCTACAT GCACGGCGGC CCGGGCCCGG CGGGGGTGTG A
 
Protein sequence
MSDRFSMEGR VAVITGGGTG IGRASALVLA ERGADVVLAG RREEPLKATA ADVEALGRRA 
IAVPTDVTKA DQCQALVDAA LGEFGRLDVL LNNAGGGETK SLMKWTDEEW HEVLELNLSS
AWYLSRAAAK PMIAQGKGAI VNISSGASLL AMPQAPVYAA AKAGLNNLTG SMAAAWTRKG
VRVNCIACGA IRTPGLEADA KRQGFDIDMI GQTNGSGRIA EADEIGYGVL FFASDASSYC
SGQTLYMHGG PGPAGV