| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4352 |
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| Symbol | |
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| ID | 4113182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 4630552 |
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| End bp | 4632828 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638033498 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_641513 |
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| Protein GI | 108801316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGATC ACTTCGGTCG GGTGCGCCTG ACCAACCCGG ACAAGGTGCT GTACCCGGCG
ACGGGCACCA CCAAGGCCGA GGTGTTCGAG TACTACGTCG ACGTGGCCGA GGCGATGGTG
CCGCACATCG CCGGCCGGGC GGTCACCCGT AAGCGCTGGC CCAACGGCGT CGGCGAGCTG
GAGTTCTTCG AGAAGCAGCT GGCCAGCTCC GCACCCGACT GGCTCGCGCG CGGCACGATC
GTGCACAAAT CCGGCACCAC CACCTACCCG ATCATCGACA CCCGCGAAGG TCTGGCGTGG
ATCGCGCAGC AGGCCGCGCT GGAGGTGCAC GTGCCGCAGT GGCGGTTCGT CGGATCGGGT
GGCGACTTGA CTCCCGGCCC GGCCACCCGC ATCGTGTTCG ACCTCGACCC CGGCGAGGGC
GTCACGTTCC GTCAGCTGTG CGAGGTCGCG CACGAGGTCC GCGACCTGAT CACCGACATC
GGGCTCACGG CCTATCCGCT GACCAGCGGC AGCAAGGGCC TGCACCTCTA CGTCCCGCTC
AAGGAGCCGA TCAGCTCCCA GGGCGCGTCG GTGCTCGCTA AACGCGTCGC CCAACAGCTC
GAGAAGGCCA TGCCCAAACA GGTCACCGCC ACGATGACCA AGAGCCTGCG CGAGGGCAAG
GTGTTCCTCG ACTGGAGCCA GAACAACGGC AACAAGACCA CGATCGCGCC GTACTCCCTG
CGCGGCCGCG AGCATCCAAC GGTTGCGGCG CCGCGCACCT GGGAGGAGAT CGAGGACCCC
GACCTGAGAC ATCTGCGATT CGACGAAGTG CTCGAGCGGA TCGAGGAGTT CGGGGACCTG
CTGGCCGATC TCGACGAGTA CGTGCCTGTC GAGGACCGGC TCACCAAGTA CCGCAGCATG
CGCGACCCGT CGAGGACGCC GGAGCCCGTG CCGCCGCTAC CGCCGAAGGC CGGCAACAAC
GACCGCTTCG TGATCCAGGA ACACCATGCC CGGCGGCTGC ACTACGACCT GCGTCTGGAA
CGCGACGGTG TGCTGGTCAG CTGGGCGGTG CCGAAGAACC TGCCCGACCG GCCCTCGGAG
AACCACCTCG CCGTGCACAC CGAGGACCAT CCGATGGAGT ACCTCACCTT CCACGGCACC
ATCCCGAAGG GTGAGTACGG CGGCGGCGAC ATGATCGTCT GGGACACCGG CACGTATGAG
ACCGAGAAGT TCAACGACCA CGCCCCGGAC GGACCCGCCA AGGGCGGGGA GGTCATCATC
ACCCTGCACG GCAACAGGAT CGACGGCCGT TACGCACTGA TCCAGACCGA CGGCAAGAAC
TGGCTCGCGC ACCGGATGAA GGATCAGGGC AACCCGACGT TCGAGGACTT CGCGCCTATG
CTGGCCACCC ACGGCTCGGT CGAGAAGTTC ACGGCGAAAC AGTGGGCGTT CGAAGGCAAG
TGGGACGGCT ACCGGCTGCT GGTCGACGCC GACCATGGCA AGCTGTGCCT GAAGTCCCGC
AGCGGCCGCG ACGTCACCGC AGAATATCCC CAATTGCGCG CGCTGGCAGC AGATCTCGCC
GACCACCATG TCGTGCTCGA CGGGGAGGTC GTCGCCCTCG ATGACAAGGG CGTGCCGAGC
TTCGGCCATA TGCAGAACCG GGCCCGGTCC ACCCGTGTCG AGTTCTGGGC GTTCGACATC
CTGCGCCTCG ACGGCCGTTG GCTGCTGAAG GCGAAGTACC GAGACCGCCG AAAGCTGTTG
GAGACGTTGG CCAGTGGGGG CGGACTGATC GTGCAACCCC TACTCGACGG CGACGGCCTC
GAGGCTCTCG AGGACGCCCG CAAACGCAGG TGGGAGGGTG TGGTCGCCAA GAAATGGGAT
TCCACCTATC AGCCGGGGCG GCGCTCGTCG GCGTGGATCA AGGACAAACT GTGGAACACC
CAGGAGGTCG TGATCGGCGG GTGGCGCGAA GGCAACGGCG GCCGCAGCAG CGGCATCGGC
GCACTGGTGC TCGGCATCCC CGGACCCGAC GGCCTGCAGT TCGTCGGCCG AGTCGGCACC
GGGTTCACCG AGAAGGAACT CGGCAGTCTC AAGAAGACGT TGGCGCCGCT GCACACCTAC
GAATCCCCCT TCGCGACAAG GCTTCCCACC CAGGACGCCA AGGGCGTGAC GTTCGTGCGG
CCCGAACTCG TCGGCGAGGT GCGTTACAGC GAGCGTACCG GCGACGGCCG GTTGCGCCAA
CCGTCCTGGC GGGGGCTGCG ACCGGACAAG ACGCCGGACG ACGTCGTGTG GGAGTAG
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| Protein sequence | MVDHFGRVRL TNPDKVLYPA TGTTKAEVFE YYVDVAEAMV PHIAGRAVTR KRWPNGVGEL
EFFEKQLASS APDWLARGTI VHKSGTTTYP IIDTREGLAW IAQQAALEVH VPQWRFVGSG
GDLTPGPATR IVFDLDPGEG VTFRQLCEVA HEVRDLITDI GLTAYPLTSG SKGLHLYVPL
KEPISSQGAS VLAKRVAQQL EKAMPKQVTA TMTKSLREGK VFLDWSQNNG NKTTIAPYSL
RGREHPTVAA PRTWEEIEDP DLRHLRFDEV LERIEEFGDL LADLDEYVPV EDRLTKYRSM
RDPSRTPEPV PPLPPKAGNN DRFVIQEHHA RRLHYDLRLE RDGVLVSWAV PKNLPDRPSE
NHLAVHTEDH PMEYLTFHGT IPKGEYGGGD MIVWDTGTYE TEKFNDHAPD GPAKGGEVII
TLHGNRIDGR YALIQTDGKN WLAHRMKDQG NPTFEDFAPM LATHGSVEKF TAKQWAFEGK
WDGYRLLVDA DHGKLCLKSR SGRDVTAEYP QLRALAADLA DHHVVLDGEV VALDDKGVPS
FGHMQNRARS TRVEFWAFDI LRLDGRWLLK AKYRDRRKLL ETLASGGGLI VQPLLDGDGL
EALEDARKRR WEGVVAKKWD STYQPGRRSS AWIKDKLWNT QEVVIGGWRE GNGGRSSGIG
ALVLGIPGPD GLQFVGRVGT GFTEKELGSL KKTLAPLHTY ESPFATRLPT QDAKGVTFVR
PELVGEVRYS ERTGDGRLRQ PSWRGLRPDK TPDDVVWE
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