| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4116 |
|---|
| Symbol | |
|---|
| ID | 4112946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4381977 |
|---|
| End bp | 4382747 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638033259 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_641277 |
|---|
| Protein GI | 108801080 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.165575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGTGA CCACCAACCG CACCGCCGTC GTGATCGGCG CCGCCTCGGG TATCGGCTGG
GCGACCGCCC GGGCGCTGGC CGCCGACGGT TTCCGCATCG TCCTGGCCGA CCGCAACGCC
GACGGCGCCC GTGAGCGTGC CGCCACCCTC GGCGAACCCC ACACGTCGGC CTACGCCGAC
GTCACCGACG AGGCGTCGGT GCAGCGCGTC TTCGACCAGA CCGGCCCCCT CGACGCGGTG
GTGAACTGCG CCGGGTTCAG CAACGTCGGC CTCATCACCG ACATGCCGGT CGACCAGTTC
CGCGAGGTCG TCGACGTCTG CCTGACCGGA GGCTTCGTCG TCGCCAAACA CGCCGGCAGG
CAGCTTCGCG AAGGTGGTGT GCTGGTGCAG ATCTCGTCGC TCAACGGCCG CCAGCCGGCC
TCCGGGATGA GCGCGTACTG CGCCGCCAAG GCCGGCCTGT CGATGCTGAC CCAGGTGGCG
GCGCTGGAGA TGGCGCCGCG CGGCATCCGG GTCAACGCCG TCGCCCCCGG CTTCGTGCAC
ACGCCGCTGA CCGATCCCGC GGCCAGCGTT CCGGGTGTGG TCGAGGAGTA CCTCGAGAAC
ACACCGCTCG GCCGGGCCGG GCAACCCGAG GACGTCGCCG CCGCGGTGGC GTTCCTGTGT
TCACCCGGTG CCTCGTGGAT GACCGGGGAG GTACTCGACC TCAACGGCGG GGCCCACCTC
AAGAGGTATC CCGACATCCT CAGCCACGTC ATGAAACTCG CGGGGGCATA G
|
|---|
| Protein sequence | MIVTTNRTAV VIGAASGIGW ATARALAADG FRIVLADRNA DGARERAATL GEPHTSAYAD
VTDEASVQRV FDQTGPLDAV VNCAGFSNVG LITDMPVDQF REVVDVCLTG GFVVAKHAGR
QLREGGVLVQ ISSLNGRQPA SGMSAYCAAK AGLSMLTQVA ALEMAPRGIR VNAVAPGFVH
TPLTDPAASV PGVVEEYLEN TPLGRAGQPE DVAAAVAFLC SPGASWMTGE VLDLNGGAHL
KRYPDILSHV MKLAGA
|
|---|
| |