Gene Mmcs_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4094 
Symbol 
ID4112924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4363340 
End bp4364557 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID638033237 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_641255 
Protein GI108801058 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGG GTACCCGGCA CCTGCTGAGC CTTGCGGCGC TGGTGACGGC CCTCCTGCTC 
GCCGGCTGCT CCTCCCCGGA ACCGCAGGCA CTGCGCACGA TCGACCCGCA GGAGCTCCAG
CAGGTCGTCG ACGGACTCGC GCGCGAACTG ACGGTGCCCG GCGCTCTTGT GCTCGCGCAC
ACCCCGCAGG GCCGTTTCAC CGCCGCGGCC GGCACCACCG AACTCGGCGC GCAGGATCCG
CCGTCCGCCG ACACCCACTT CCGCATCGCC TCCAACACCA AGACCATGAC GGCGGCGCTG
ATCGTGCTGC TCGCCCAGGA CGGCAAGGTC CGATTCGACG ACCCCGTCAC CGACTGGGTC
CCGGACGTGC CGAACGGCGA GAACATCACC GTCGCACAGC TTCTCACCAT GCGCAGCGGT
CTCTACGGCT ACACGGGCGA CGAGGCGCTG TCGGCCGCCA TGGACGCCGA CCCCCAAAAG
CCTTGGACGC CGGCGGAAGT GCTGGCCATC GCCTTCCGGC ATCCGCCACA GTTCGCGCCC
GACTCCGCCT ACGAGTACAG CAACACCAAC TACGCGCTCC TCGGCCTCAT CGCCGAGAAG
GCCGGCGGCC AACCGCTGGC CCGGCAGTTC CGCGACCGGT TGTTCGGCCC CGTCGGCCTG
ACCCAGACGT CCCTGCCCGC CGCCGACGAC ACCACCATGC CCACGCCCTA TTCGCACGGC
TACATGTACG GCGGAAGCTT CTACGCCCTG GCCGACGAGC CGTATCCCGC CGACATGCAG
GCCGCCGCCC GCGCCGGGAC ACTGCAGCCC GTCGACTACA CCAACCAGAA CTCCTCGTAC
GCGACCGCCG CGGGTGGCGC GATCTCGACG GCCGACGATC TGGCCACCTG GATGAAGGCG
CTCGTCACCG GGAAGGTCTT CGACGCCGAC CACCACCGCC AGTGGACGGG CAGCCTGCGC
CCCGAGGACC CGGCCGCCCC CGACGGTCAG CAGTACGGGT ACGGGATCTC CTATCAGCGG
TTCGGCCCGA ACGCCGCGAT GTACTACCAC GGCGGGGAAC TGCCCGGTTT CAACTCGTTC
ATGGGTTACG ACCCGGACAA CGACGTGACC CTGGTGATCT GGACGAACCT CACGCTGTCG
CCGGACGGCC GGACCACCGC CCAGGCGATG CTGGCCCCGA TGCTCGAGCA GATCTACGCC
GGGTTGTCGC TGGGATGA
 
Protein sequence
MKRGTRHLLS LAALVTALLL AGCSSPEPQA LRTIDPQELQ QVVDGLAREL TVPGALVLAH 
TPQGRFTAAA GTTELGAQDP PSADTHFRIA SNTKTMTAAL IVLLAQDGKV RFDDPVTDWV
PDVPNGENIT VAQLLTMRSG LYGYTGDEAL SAAMDADPQK PWTPAEVLAI AFRHPPQFAP
DSAYEYSNTN YALLGLIAEK AGGQPLARQF RDRLFGPVGL TQTSLPAADD TTMPTPYSHG
YMYGGSFYAL ADEPYPADMQ AAARAGTLQP VDYTNQNSSY ATAAGGAIST ADDLATWMKA
LVTGKVFDAD HHRQWTGSLR PEDPAAPDGQ QYGYGISYQR FGPNAAMYYH GGELPGFNSF
MGYDPDNDVT LVIWTNLTLS PDGRTTAQAM LAPMLEQIYA GLSLG