Gene Mmcs_3887 details

Gene Information

• Locus tag: Mmcs_3887
• Symbol: prfA
• ID: 4112717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 4139166
• End bp: 4140239
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638033029
• Product: peptide chain release factor 1
• Protein accession: YP_641048
• Protein GI: 108800851
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.553297
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCTC CCACCACAGC GATTGACGCG TTGCTCGCCG AGCACGCCGA CCTGGAGCGT 
CAGCTCGCCG ACCCCGCGCT GCACGCCGAC GCCGGCAAGG CGCGCAAGGC CGGTCGCCGG 
TTCGCGCAGC TGGCGCCGAT CGTCGCCACG TACCGAAAAC TCGAAGCCGC CCGCGGTGAC 
CTCGAGGCGG CCCGTGAGCT CGGCGCCGAC GATGCGTCGT TCGCCGCCGA GGTGCCCGAA 
CTCGAGGCCA CCGTCGACCA ACTCGAGACC CAGCTGTCGG ATCTGCTGGC GCCGCGTGAT 
CCGCACGACG CCGACGACAT CGTGCTCGAG GTGAAGTCGG GGGAGGGCGG CGAGGAGTCG 
GCCCTGTTCG CCGCCGACCT CGCGCGGATG TACATCCGGT ACGCCGAACG GCACGGCTGG 
TCGGTCACGA TCCTCGACGA GACGACGTCC GACCTCGGTG GATACAAGGA CGCAACGCTC 
TCGATCCGCA GCAAGGGCGA CTCGGCCGAC GGGGTGTGGT CGCGGCTGAA GTTCGAAGGC 
GGCGTGCACC GCGTGCAACG GGTGCCGGTC ACCGAATCGC AGGGCCGCGT CCACACGTCG 
GCGGCCGGCG TGCTCGTCTA CCCCGAACCC GAAGAGGTCG AACAGGTCCA GATCGACGAG 
TCCGACCTGC GCATCGACGT CTACCGGTCC TCGGGTAAGG GCGGTCAGGG CGTCAACACC 
ACCGACTCGG CCGTGCGGAT CACCCACCTG CCGACCGGCA TCGTCGTCAC CTGCCAGAAC 
GAACGCTCTC AGCTGCAGAA CAAGGCGCGT GCCATGCAGG TGCTCGCCGC CCGGTTGCAG 
TCGCTCGCCG AGGAGCAGGC CTCGGCCGAT GCGTCGGCCG ACCGCGCCAG CCAGATCCGC 
ACCGTCGACC GCAGCGAGCG GATCCGTACG TACAACTTCC CGGAGAACCG GATCGCCGAC 
CACCGCATCA ACTTCAAGGC GCACAACCTC GACCAGGTGC TCGACGGCGA TCTCGACCCG 
CTGTTCGACG CGCTGGCGGC CGCCGACAAA CAGGCGCGAC TGCAGAGCTC ATGA 

 

Protein sequence

MSAPTTAIDA LLAEHADLER QLADPALHAD AGKARKAGRR FAQLAPIVAT YRKLEAARGD 
LEAARELGAD DASFAAEVPE LEATVDQLET QLSDLLAPRD PHDADDIVLE VKSGEGGEES 
ALFAADLARM YIRYAERHGW SVTILDETTS DLGGYKDATL SIRSKGDSAD GVWSRLKFEG 
GVHRVQRVPV TESQGRVHTS AAGVLVYPEP EEVEQVQIDE SDLRIDVYRS SGKGGQGVNT 
TDSAVRITHL PTGIVVTCQN ERSQLQNKAR AMQVLAARLQ SLAEEQASAD ASADRASQIR 
TVDRSERIRT YNFPENRIAD HRINFKAHNL DQVLDGDLDP LFDALAAADK QARLQSS