| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3690 |
|---|
| Symbol | |
|---|
| ID | 4112521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3946483 |
|---|
| End bp | 3947784 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638032829 |
|---|
| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_640852 |
|---|
| Protein GI | 108800655 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCA CCGCCGCAAC CGATCTCACC ACCGCCGTCT GGCCGGGCAC CACGCCGCGT
CTGCTGCACG TGCCCGCCGG GCGGGAGGAC TACGCCGACT ACGCGCAGTC CGGCGGCTAC
CGCGAGCTGC CCGACCCCGA ACGACTGCTC GAGGAAGTCG AACTGTCCGG CCTGCTCGGA
CGTGGCGGTG CCGCGTTCCC GATGGCGGTC AAACTGCGCT CGGTGCGCGA TCACGGCCGT
ACCCGCGGCG GCGCCGTCGC GATCGCCAAC GGCGAAGAGG GCGAACCCGC GTCGATCAAG
GACCGGTGGC TGCTGCGGCA CCGCCCGCAC CTTGTGCTCG ACGGTCTGCG CCTGGCCGCG
CGCGTCGTGG AGGCCGAGCG CGCAATCGTC TACGTCTCCG ATCCGGAGTC CGCCCGCAGT
GTCGAAACCG CGCTGACACA GGTCGATTCA CCGGTTCTGG ACGGTGTGTC GATCAGCGTC
GTGGTCGTCG ACCCCGGTTA CGTCGCCGGT GAGGAGACCG CCGCCGTCCG TGCCATCGAC
GGGGGGCCCG CCAAACCGAC GGACAAGCCG CCGCGGCCGT TCGAGGAGGG GGTGGGTGGG
CTGCCCACAC TGGTCAGCAA CGTCGAGACG CTCGCCAACC TGCCGTATCT GCACGAGCAC
GGGGCGCGGG AGTACCGGTC GGCGGGCACA CCGTCGTCCC CCGGCACCTT CCTGGCGACC
GTCACCGGCG GTGGCGGGCC ACCGGCGCTC TACGAGTTGC CGCACGGTGT CGCCCTCGCC
GATGTGCTGA CCTGGCACGG GATCTCGCCC GATTCGGTCA GCGGCGTGCT GATGGGCGGT
TACTTCACCG GGCTGCTCAA CCGTGACGTC CTCGACGCGA CGCTCGACCA CGAGGCGCTG
CGCCGCCTCG GCAGCGGTCT GGGCTGCGGG GCGGTCGGGG TGCTGACCGA CGAATGCCCC
GTCGCGGTGG CCGCATCGGT GCTGGCCTAC TTCGACCGCG AGAACGCCGG ACAGTGCGGA
TCCTGTTTCA ACGGGACCGC CGCCATGGCG GCCGTGGCTG TGGCGCTGCG CGACGGCGTG
GCCTCCGACG ACGATCTGGC CCGGCTGGAG CGCTGGTCGG TGGTGCTGCG GGGGCGGGGT
GCGTGCGGGA CGCTCGACGC GGCCACGAAC GTCGCCGCCA GCCTGCTCAC CGCGTTCCCG
CAGGCGGTGG CCCGGCACCG GGAGGGCAGC TGTGATCGCT GCGCCGTCGA CCTGTACGAC
GTCCGACGAC CCTACGAAGT GGAGGCGGTG GTGAGCGCGT GA
|
|---|
| Protein sequence | MNPTAATDLT TAVWPGTTPR LLHVPAGRED YADYAQSGGY RELPDPERLL EEVELSGLLG
RGGAAFPMAV KLRSVRDHGR TRGGAVAIAN GEEGEPASIK DRWLLRHRPH LVLDGLRLAA
RVVEAERAIV YVSDPESARS VETALTQVDS PVLDGVSISV VVVDPGYVAG EETAAVRAID
GGPAKPTDKP PRPFEEGVGG LPTLVSNVET LANLPYLHEH GAREYRSAGT PSSPGTFLAT
VTGGGGPPAL YELPHGVALA DVLTWHGISP DSVSGVLMGG YFTGLLNRDV LDATLDHEAL
RRLGSGLGCG AVGVLTDECP VAVAASVLAY FDRENAGQCG SCFNGTAAMA AVAVALRDGV
ASDDDLARLE RWSVVLRGRG ACGTLDAATN VAASLLTAFP QAVARHREGS CDRCAVDLYD
VRRPYEVEAV VSA
|
|---|
| |