Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3678 |
Symbol | |
ID | 4112509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 3936418 |
End bp | 3937278 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638032817 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_640840 |
Protein GI | 108800643 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCGCG TAGAAGGCAA GGTCGCATTC ATCACGGGCG CAGCGCGCGG GCAGGGTCGC AGCCACGCCA TCCGACTGGC CGAAGAAGGC GCCGACATCA TCGCCATCGA CATCTGCGCC GACATCGAGA CCGTGGGTTA CCCGCTGGCC ACCCGGGAAG ATCTCGAGGA GACCGCCCAG TACGTGGAGA AGGCGGGCCG CAAGGCCGTG ATCGCCCAGG CCGACGTCCG TGACGCCGCC CAACTGAAGC AGGCGGTGGA CAACGGCGTG GCCGAACTCG GACACCTCGA CATCGTCGTC GCGCAGGCCG GCATCGCGGC GATGAAGGGC GCCCCGCCGA TGCAGGCGTG GACCGACGGC ATCAACACGA ATTTCGTCGG GACCATCAAT GCCATCCAGG TGGCGCTGCC CCACCTCAAG GAGGGCGCCT CGATCATCGC CACCGCCTCG GCGGCCGCGC TGATGGACGC CTCGAAGAAG GACCGCCCGG GCGCCGACCC CGGGGGGATG GGCTACATGA CCTCCAAGCG TCTCATCTCC CAGTACATGC ACGACCTGGC GACCGAGTTG GCGGTGCGCA ACATCCGCGC CAACGTCATC CACCCCACCA ACTGCAACAC CGACATGCTG CAGAGCGAGC CGATGTACCG CTCGTTCCGG CCCGACCTCG AGAAGCCCAC GCGCGCCGAC GCGGAGCTCG CGTTCGGTGT CCAGCAGGCC ATGCCTGTGC CGTTCATCGA GCCCGAGGAC ATCAGCAACG CGGTGCTGTG GCTGGCCTCC GACGAGTCAC GCTTTGTCAC CGGCATGCAG TTGCGCGTGG ACGCTGGCGG CTACCTCAAG TGGTACGACT ACCACGTCTG A
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Protein sequence | MGRVEGKVAF ITGAARGQGR SHAIRLAEEG ADIIAIDICA DIETVGYPLA TREDLEETAQ YVEKAGRKAV IAQADVRDAA QLKQAVDNGV AELGHLDIVV AQAGIAAMKG APPMQAWTDG INTNFVGTIN AIQVALPHLK EGASIIATAS AAALMDASKK DRPGADPGGM GYMTSKRLIS QYMHDLATEL AVRNIRANVI HPTNCNTDML QSEPMYRSFR PDLEKPTRAD AELAFGVQQA MPVPFIEPED ISNAVLWLAS DESRFVTGMQ LRVDAGGYLK WYDYHV
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