Gene Mmcs_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3343 
Symbol 
ID4112175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3543122 
End bp3543859 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID638032475 
Producthypothetical protein 
Protein accessionYP_640506 
Protein GI108800309 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0639864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCTG ATGTCTGGCA GCAACATTCG TTGCTACAGC TGGCCGAGGT GGACGCCGGG 
CTGGCGCGGA TCGAACACCG GGTGCGCAAG CTGCCCGAAC AGGACGAACT CGACCGGGTC
CGCGCCGAAC ACGGTGCGGC CACCGACAAG GTCGCGGTGC TCGGCATCGC GATGGACGAT
CTCGACGAGC AGGTGGCCAA GTTCGAGTCC GAGATCGACG CCGTCCGTCA GCGCGAAGAC
CGCGACCGGG CCCTGCTGGA GGGTGACAGC GTCGGCGCCA AACAGGTCGC CGAGTTGCAG
CACGAACTCG AGACGCTCGA ACGTCGCCAG GCGAGCCTCG AGGACTCCCT GCTGGAGCTG
ATGGAGCGCC GCGAGGAACT GGCCGCCCAG CGCGCGGCGG AACTCGCGCG CGTCGACGAA
CTGCAGATCA CGCTGTCGGC AGCTCAGCGC GCGGTCGCCG ACGCGGTGGC CGAACTGGAC
GGATCCCGGC AGGAGAACCT CAGCCGGCGC GAGGAGCTGC TGGGGTCCCT GCAGTCCGAC
CTCGTCGACC TCTACGAGCG GCAACGAGCC CGTGGCGGTG CGGGCGCCGG GCAGTTGCAG
GGTCGCCGAT GCGGCGCCTG CCGCCTCGAG ATCGACCGGG GCGAGATGGC CCGCATCTCG
GCCGCGCCCG ACGACGAGGT GCTGCGCTGC CCCGAGTGCA ACGCAATTTT GGTGCGCGCG
GAGGGCTTCA AGAAGTGA
 
Protein sequence
MKADVWQQHS LLQLAEVDAG LARIEHRVRK LPEQDELDRV RAEHGAATDK VAVLGIAMDD 
LDEQVAKFES EIDAVRQRED RDRALLEGDS VGAKQVAELQ HELETLERRQ ASLEDSLLEL
MERREELAAQ RAAELARVDE LQITLSAAQR AVADAVAELD GSRQENLSRR EELLGSLQSD
LVDLYERQRA RGGAGAGQLQ GRRCGACRLE IDRGEMARIS AAPDDEVLRC PECNAILVRA
EGFKK