| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3089 |
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| Symbol | |
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| ID | 4111921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 3268539 |
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| End bp | 3269681 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638032219 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_640252 |
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| Protein GI | 108800055 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.614785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGCCG CCCTCGCGGC GCCCACCGGC GACATCGCCG CGGCCGAGGA CGCGCTCGCC
GATGCCTTCG AACGCGCGCT CCGGAGATGG CCGGTCGACG GTATCCCGGC CGAACCCGCC
GCCTGGGTGA TCACCGTCGC CCGCAACAGA TTGCGCGACC GCTGGCGCTC GGCCGGTCAC
CGCAGAGCCG CTCGTCTCGA CGAGAACCTC GACGTGACAG CGGAATCCGT CGACTGGCCG
GCCATCCCGG ACAAACGCCT GGAGCTCATG CTGGTCTGTG CGCATCCCTC GGTGGCGGTC
AACGTCCGTA CGCCGCTGAT GCTGCAGGTG GTCATGGGTG TCGACGCGGC GGCGATCGCC
GAGGCGTTCG CCGTCGAACC GGCGACCATG GCGCAGCGGC TCGTACGGGC CAAGCGGCGT
ATCCGCGACA CGGGTGTGCC ATTCACCCTG CCGGAACGTG ACGATCTGGC CGAGCGGCTG
CCCGCCGTGC TCGAATCGGT CTACGGCGTC TATGCCATCG ACTGGCAGCG CGGCCCACCC
GACGACCCGG GGGATTCGTT GGCCGCCGAG GCGTTGCACC TGACCGCCCT GCTGACCGAG
TTGCTGCCCG CCGATCCGGA GGTGCTCGGC CTGGCCGCGC TGGTGTGTTT CGGCGAGGCG
CGCCGCCCCG CGCGGCGTGG GGTCGAGGGC GCGTTCGTCG GCCTCGACGA TCAGGACAGT
GGGCGGTGGG ACCACGAGTT GATCGCCCGG GCCGAGGATC TGCTGCGGCG CGCGCACACC
CACCGGCGGC CGGGCCGGTT CCAGTACGAG GCGGCCATCC ACTCGGCACA CTGTCACCGC
CCGGTGGATC GGCGGGCGCT GCGCAAGCTC TATCTGGCCC TGCTGCGGGT GGCGCCGTCA
CTCGGTGCGG CGGTGGCGCT GGCGGCCCTC GACGGCGAGA TCGACGGGCC GGACGCCGGT
CTGCGGGCAC TCGCGGCGAT CGATGACCCT GCGCTCGACC GGTTTCAACC GGCGTGGACC
ACCCGCGCAC ACCTTCTCGA GCGCGCGGGC CGAACGGCCG AGGCAAATAT CGCCTACCAG
CGGGCACTCG CGATCACCAG CAACCCCGCA CTGAGAGCGC ATCTACGGCA ACGCCTGCGG
TGA
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| Protein sequence | MLAALAAPTG DIAAAEDALA DAFERALRRW PVDGIPAEPA AWVITVARNR LRDRWRSAGH
RRAARLDENL DVTAESVDWP AIPDKRLELM LVCAHPSVAV NVRTPLMLQV VMGVDAAAIA
EAFAVEPATM AQRLVRAKRR IRDTGVPFTL PERDDLAERL PAVLESVYGV YAIDWQRGPP
DDPGDSLAAE ALHLTALLTE LLPADPEVLG LAALVCFGEA RRPARRGVEG AFVGLDDQDS
GRWDHELIAR AEDLLRRAHT HRRPGRFQYE AAIHSAHCHR PVDRRALRKL YLALLRVAPS
LGAAVALAAL DGEIDGPDAG LRALAAIDDP ALDRFQPAWT TRAHLLERAG RTAEANIAYQ
RALAITSNPA LRAHLRQRLR
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