Gene Mmcs_2791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2791 
Symbol 
ID4111623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2937104 
End bp2937874 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID638031915 
Productshort chain dehydrogenase 
Protein accessionYP_639954 
Protein GI108799757 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.298424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG CCGAAATGAC CGTGGATCTC GACTTCTCAC TGACCGGGAA GGTCGCACTG 
GTCACCGGCG GCGCATCGGG CATCGGTGCG GCGATCGCAT CGGCGTTCGC CGCCAAGGGC
GCCCGCGTGG CCGTGGCCGA CCTCAACGAA CCCGGTGCAC AGGCGCACGC CGCGGCGTTG
GCCACCGAGA GTTCGGGATT CCGTTGCGAT GTCAGCGATC CCGCGTCCGT CGCGGCGACC
GTCGACGCCG TGGCCGGCAC CTTCGGCAGG ATCGACATCC TGGTCAACAG TGCCGGGGTG
GCCCGGCTGG CGCCCGCCGA GGACCTCACG CTCACCGACT GGGAGTCGAC GATCGACATC
AACCTCAAGG GCACGTTCCT GATGTGCCAG GCGGTGGGCC GCCGCATGCT GGCCGACGGT
GGCGGCAGCA TCGTCAACCT GGCGTCTCAG GCCGCCTCCG TGGCACTCGA CCAGCACGTG
GCGTACTGCG CGTCGAAGTT CGGGGTGGTC GGGGTGTCGA AGGTCCTGGC CGCCGAATGG
GGCGGGCGGG GCATCCGGGT CAACACGATC TCGCCCACGG TGGTCCTCAC CGAACTGGGC
CACAAGGCCT GGGACGGACC GCGCGGCGAT GCCCTCAAGA AGCTGATCCC CATCGGCCGG
TTCGCCTACC CGCCCGAGAT CGCCGCCGCC GCGGTCTACC TCGCCTCCGA CGCGGCCGCG
ATGGTCACCG GCGCCGACCT GGTCGTCGAC GGCGGCTACA CCGTCAAATA G
 
Protein sequence
MTDAEMTVDL DFSLTGKVAL VTGGASGIGA AIASAFAAKG ARVAVADLNE PGAQAHAAAL 
ATESSGFRCD VSDPASVAAT VDAVAGTFGR IDILVNSAGV ARLAPAEDLT LTDWESTIDI
NLKGTFLMCQ AVGRRMLADG GGSIVNLASQ AASVALDQHV AYCASKFGVV GVSKVLAAEW
GGRGIRVNTI SPTVVLTELG HKAWDGPRGD ALKKLIPIGR FAYPPEIAAA AVYLASDAAA
MVTGADLVVD GGYTVK