| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2153 |
|---|
| Symbol | |
|---|
| ID | 4110986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2294023 |
|---|
| End bp | 2294901 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638031274 |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_639317 |
|---|
| Protein GI | 108799120 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CCGTCCTGTT CGACGCGCCC GGGCCGCGCG CCCGGCGACG CAACATCGTC
ATCACGCTCA TCACGTTGGC GATCACCGCG CTGATCGTCT GGGTTGTGTA CTCGCGGCTC
GACGCGAAAG GTCAGCTCAC CGCGGCGAAG TGGGAGCCGT TCCTGACGCC GAACCTGTGG
ACCACCTACG TGCTGCCCGG CGTGCAGGGC ACGTTGACCG CGGCGGCGGT GTCGATCGTG
CTGGCGCTGA TCCTGGGATT CGGGCTCGGA GTCGGCAGGC TGTCGGTGAT CACGCCGATC
CGCTGGGTGT GCGCGGTGAT CGTGGAGTTC TTCCGCGCGG TCCCGGTGCT GATCATGATG
ATCTTCGCGT ACTTCCTGTA CGCGTTCTAC GACGTCTTCC CCTCCAAACA CCTTGCGCTG
GCCGGCGTCA TCACCGGCCT CACGCTCTAC AACGGCGCGG TGATCGCCGA GATCGTCCGG
GCCGGGGTGA AGGCGTTGCC GCGCGGTCAG GCCGAGGCCG CCTCGGCGCT GGGCCTGCGC
TGGGGGCAGA CCCAGCGCTC GATCCTGCTG CCGCAGGCCG TCACGTCGAT GTTGCCGGTC
CTGGTGTCCC AACTCGTGGT GGTCCTGAAG GACACCGCGA TCGGCTACCA GATCACGTTC
GTCGAGATGG TGCGTCAGGG CACCGTGGTC GGCTCGTCCT ACGGCAATTA CATCCCCGCC
CTCATCGTCA TCGCCGTGTT GATGATCAGT GTGAACTTCG CGTTGTCCGC CCTGGCGACC
AAACTCGAAC GCCGGATGCG GCGGTCGCGG CGCGGACCGG CGCCGCTGGA CACCGAGGCC
ATCGAGCAGG AAGGCGCGCC GGGCGCGAAG GTGGTGTAG
|
|---|
| Protein sequence | MSGTVLFDAP GPRARRRNIV ITLITLAITA LIVWVVYSRL DAKGQLTAAK WEPFLTPNLW
TTYVLPGVQG TLTAAAVSIV LALILGFGLG VGRLSVITPI RWVCAVIVEF FRAVPVLIMM
IFAYFLYAFY DVFPSKHLAL AGVITGLTLY NGAVIAEIVR AGVKALPRGQ AEAASALGLR
WGQTQRSILL PQAVTSMLPV LVSQLVVVLK DTAIGYQITF VEMVRQGTVV GSSYGNYIPA
LIVIAVLMIS VNFALSALAT KLERRMRRSR RGPAPLDTEA IEQEGAPGAK VV
|
|---|
| |