| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2047 |
|---|
| Symbol | |
|---|
| ID | 4110880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2196071 |
|---|
| End bp | 2197843 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638031168 |
|---|
| Product | penicillin-binding protein, transpeptidase |
|---|
| Protein accession | YP_639211 |
|---|
| Protein GI | 108799014 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0844454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACGG TTCTCGGCGG CCTCGCCCTC AGTGGCTGCA CCCCCAAACC CAACGGCCCC
GAACCCGCGG CCGAGGAATT CTTCGCCGCG CTCTCCACCG GCGACACCGC GGCGGCCGCC
GAACTCGCCG ACCGCCCCGC CGAGGCGCGC GCCGCGCTCA ACGAGGCATG GGCGGGTCTG
CAGGCCACCC ACCTCGACGC GCAGATCCTC GGGTCGAAGT ACTCCGAGGA CACCGGCAGC
ATCACCTACC GCTACACCTG GCACCTGCCC AAGGAGCGGA CCTGGACCTA CGACGGTCAA
CTCAACATGG TGCGCGACGA GGGTCGTTGG GAAGTGCGTT GGGCCACAAC AGGTCTGCAC
CCGCGACTGG GTGAGAACCA GTCATTCGCG CTGCGCGCCG ACCCGCCGCC GCGGGCCTCG
GTCAACGAGC GGGGGGGCAG CGACGTGCTG GTGCCCGGGT ACCGCTACCA CCTCGCGCTC
GACGCCAAGG CCGCCGGCGC GGAGCTGATG GCGACCGCCC GCGTGGTCGC CGACGTCCTG
CGCCCCTTCA ACCCGACCAT CGACGCCCAG CGCCTGGCCG AACAGGCGTC CTCGATGGCC
GAGCCGATGA GCCTGATCAT GCTGAACCAG GCCGACCACG ACCGGGTGGC CGGCGTTCTG
GGCCCGCGCC CGGGTGTGGT GATCACACCG CAGCCCGACA TGCTGCCCAC CGACGAGGAG
TTCGCGCCGG CCATCATCAA CGAGGTCAAG AAGGAGGTCG CCGACGAACT CGACGGCCGC
TCCGGCTGGC GGGTGGTCAC CGTCAACCAG AACGGGGTCG ACGTCGACGT CCTCAACGAG
GTCCCCGGCG ACCCCGCGCC GTCGGTGACC ATCAGCCTCG ACCGGGCCGT GCAGACCGCC
GCGCAGAATG CGGTGAACTT CACCGGCAAG CAGGCGATGA TCGTCGCCAT CAAGGCCTCG
ACCGGCGAGA TCCTGGCCGT CGCGCAGAAC GCCGCCGCCG ACGCCGAGGG CCCGCTGGCC
ACCATGGGTC TGTATCCGCC CGGGTCGACG TTCAAGATCG TCACCGCGGC CGCCGCGATC
GAACGCGATA TGGCCACCCC GAACACGATG CTCGGCTGCC CGGGACACAT GGACATCGGT
CACCGCACGG TGCCCAACTA CGGCGGCTTC GACCTCGGCA CCGTGCCGTT GTCACGGGCG
TTCGCCAGCT CGTGCAACAC CACCTTCGCC GAATTGGCCA GCCGGATGCC GCCGCGGGGC
CTGACCACCG CGGCCGCCCA GTACGGCATC GGGCCCGACT ACCGGGTCGA GGGCATCCCC
ACGGTCTCGG GATCGGTGCC GCCCACGGTC AACCTCGCGG AGCGCACCGA GGACGGGTTC
GGTCAGGGCA AGGTCGTGGT CAGCCCGTTC GGGATGGCGC TCGTGGCCGC GACGGTCGCC
GCCGGCCAGA CCCCGGTGCC CCGGCTGATC GAGGGCCGCG ACACCGTCGT CACCGGAGCG
CACGAACCCG TCCGCCCGGA GGTCGTCGAG GCCCTGCGCC CGATGATGCG CCTGGTGGTG
ACCAACGGCA CCGCCAAGGA TCTGGCCGGC GCGGGGGACG TGCGCGGGAA GACCGGTGAG
GCCGAATTCG CAGGCGGCTC CCATTCCTGG TTCGCCGGGT ACCGCGGAGA CCTCGCCTTC
GCCGCGCTCA TCGTGGGCGG CGGCAGTTCC GAGTACGCGG TGCAGATGCT GCGGGGCATG
CTCGACGGAC TGCCCGCCGA CTACCTGGCC TGA
|
|---|
| Protein sequence | MATVLGGLAL SGCTPKPNGP EPAAEEFFAA LSTGDTAAAA ELADRPAEAR AALNEAWAGL
QATHLDAQIL GSKYSEDTGS ITYRYTWHLP KERTWTYDGQ LNMVRDEGRW EVRWATTGLH
PRLGENQSFA LRADPPPRAS VNERGGSDVL VPGYRYHLAL DAKAAGAELM ATARVVADVL
RPFNPTIDAQ RLAEQASSMA EPMSLIMLNQ ADHDRVAGVL GPRPGVVITP QPDMLPTDEE
FAPAIINEVK KEVADELDGR SGWRVVTVNQ NGVDVDVLNE VPGDPAPSVT ISLDRAVQTA
AQNAVNFTGK QAMIVAIKAS TGEILAVAQN AAADAEGPLA TMGLYPPGST FKIVTAAAAI
ERDMATPNTM LGCPGHMDIG HRTVPNYGGF DLGTVPLSRA FASSCNTTFA ELASRMPPRG
LTTAAAQYGI GPDYRVEGIP TVSGSVPPTV NLAERTEDGF GQGKVVVSPF GMALVAATVA
AGQTPVPRLI EGRDTVVTGA HEPVRPEVVE ALRPMMRLVV TNGTAKDLAG AGDVRGKTGE
AEFAGGSHSW FAGYRGDLAF AALIVGGGSS EYAVQMLRGM LDGLPADYLA
|
|---|
| |