Gene Mmcs_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1896 
Symbol 
ID4110730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2040108 
End bp2040902 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID638031016 
Productxylose isomerase-like TIM barrel 
Protein accessionYP_639061 
Protein GI108798864 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.31703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGC GGCTCTCGGT GCACAGTGTG ACGTTCTTCG GGGATCCGCT CGCCGAGTTG 
CACCACCAGT GGCACGCACT GGGTCTGACG CCGTTGAGCA TCCTCGACTC GCAGCTGTCG
GACCCCGCGC TGGCGCCGCT GCTCGCCGCA CACGGATACC GGGTCGACGC CGTCTACCAC
CTGTTCGCCG GCGGGCGGCT CCAGTCCGAC CGCACCGCCG CCAGGGACGC GTTGACGAAT
GTGATCGACG CGGCGGCCGA TGCGGGCGCC CGCATGATCT ACCTGCTCAC CGGCGGACGC
GGATCGCTGT CGTGGCGGCA GGCCGCCGAT GCGTTCTGCG AGGCGGTGGC CCCCTGCCTC
GCTCACGCGC GCAGGCGCGG CGTGGCGTTG GCGATCGAGA ACGCGTCGAG CCTCTACGCC
GACATGCACA TCGCCCACTC GCTGCGCGAC ACCATCGCGC TCGCCGAGAT GGCCGACCTC
GGAATCTGTG TCGACCTGTT CCACTGTTGG GCCGAGGCCG AACTCCCCGA ACTGCTCGAC
CGTGCCCTTC CGCGTACCGA ACTCGTCCAA GTGAGCGACT ACGTTCTGGG TGACCGGTCG
CTGCCCGCGC GCGCGGTTCC CGGAGACGGG GTGATACCGC TCGAACCGTG CGTGGCCCAG
ATCCTCGCCG GTGGCTACAC GCACGGATTC GACCTCGAGC TGATCGGGCC GCGGATCGAG
GCCGAGGGCC GCGCGGTCGC GGCGCGACGG GCGTGCGAGA TCGTCAGCGC GATGCTCGAC
CGGCTGGTGC GGTGA
 
Protein sequence
MHERLSVHSV TFFGDPLAEL HHQWHALGLT PLSILDSQLS DPALAPLLAA HGYRVDAVYH 
LFAGGRLQSD RTAARDALTN VIDAAADAGA RMIYLLTGGR GSLSWRQAAD AFCEAVAPCL
AHARRRGVAL AIENASSLYA DMHIAHSLRD TIALAEMADL GICVDLFHCW AEAELPELLD
RALPRTELVQ VSDYVLGDRS LPARAVPGDG VIPLEPCVAQ ILAGGYTHGF DLELIGPRIE
AEGRAVAARR ACEIVSAMLD RLVR