| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1872 |
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| Symbol | |
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| ID | 4110706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 2017213 |
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| End bp | 2018034 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638030992 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_639037 |
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| Protein GI | 108798840 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.57566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAAC TCGACAACAC CGTCGCGCTG GTGACCGGCG CCGCCCGCGG TCAGGGCCGT
TGCCACGCGG TGGCACTGGC CGCCGAGGGC GCCGACATCA TCGCGATCGA CCGCTGCGCC
GACATCGAGT CCATCCCGTA TCCCCTGGCG ACCAAGGATG ATCTCGACGA GACCGCCGAT
CTGGTCCGGG CCGCAGGACG TCAGGTGGTC ACCGCGATCG CCGACGTGCG CAGCCTGTCC
GACCTGCAGG CCGCGGTGCG CACCGGGACC GCCGAGCTGG GTGAACTGGA CATCGTGGTG
GCCAACGCCG GCGTCGTGGC GATCGGGCTG ACCGACCCCA CCGACGAACA GCTCTACCGC
GACATCGTCG ACACCAACCT CAACGGCGTC TGGCACACCA TCGCGGCCAC CGCTCCCTCC
ATCATCAGCA AGGGACGCGG CGGGTCGATG ATCCTCACCA GCTCCATGCA GGGTCTGGTC
GGCCGCGGCG GCGACGGCAG CGCCGCGATG TTCGCCTACG CGGCGTCCAA ACACGGCGTC
GTCGGGCTGA TGCGTTCGGC GGCCAACGCG TATGCGGCGC ACAATATCCG GGTCAACTCG
GTGCACCCGA CCGGTGTCGG CACCCCGATG ATCCTCAACG AACACATGGC CACCGTGTTC
GCGGCGAACC CGACCTCCGA CGCCATGGCG GGCAACCTGC TGCCCGTCCC GTTCGTCGAA
CCCGAGGACG TCGCCAACGC CGTCGTGTGG CTGGCCGGCC CGAAGGCGCG CTACATCACC
GGAACGGCGC TACCGGTCGA CGCGGGCCAC GCGGTGATGT AG
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| Protein sequence | MGELDNTVAL VTGAARGQGR CHAVALAAEG ADIIAIDRCA DIESIPYPLA TKDDLDETAD
LVRAAGRQVV TAIADVRSLS DLQAAVRTGT AELGELDIVV ANAGVVAIGL TDPTDEQLYR
DIVDTNLNGV WHTIAATAPS IISKGRGGSM ILTSSMQGLV GRGGDGSAAM FAYAASKHGV
VGLMRSAANA YAAHNIRVNS VHPTGVGTPM ILNEHMATVF AANPTSDAMA GNLLPVPFVE
PEDVANAVVW LAGPKARYIT GTALPVDAGH AVM
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