Gene Mmcs_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1650 
Symbol 
ID4110485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1786740 
End bp1787540 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID638030770 
Producthypothetical protein 
Protein accessionYP_638816 
Protein GI108798619 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGGCT TTTCGCTCCG TAAGAACCTC CCGACAGCGG CTGACGTCAA AGCTCTGAAA 
CCACTCAGCA TCATTGGCGG GCTCTACGCG ATGACGCTGG ACATGTTCGT CGCGATGTTC
AAACCACCCT TCCAATGGCG CGAGTTCCTC CTCCAGACAT GGTTCGTGGC GCGGGTTTCC
ATGGTCCCAG CGCTGACGTT GTCGATTCCC CTCGTTGTCC TCACGTCATT CACCTTCAAC
ACGTTGCTCG GCGAATTCGG CGCCGCAGAC TTCTCAGGAA CCGGCGCAGC ATTGGGCGCG
GTCAACCAGA TCGGCCCCTT CGTGACTGTC CTCGTCGTCG CAGGGGCCGG CGCTTCGGCG
ATGTGCGCCG ATCTCGGGTC GCGCACGATC CGCGAGGAAG TCGATGCAAT GCGGGTCCTC
GGCCTTGACC CGATCCATTC CCTTGTCGTC CCTAGAGTGC TGGCCACGAC GTTGGTCGCG
GTGCTCCTGT CATCTGTCGT GACCGTTACT GGGCTCCTAG GCGCTTTCTT GTTTTCGGTG
TACTTCCAGC ATGTAACGCC CGGGTCATTC GTCGCCAGCA TGACGCTGAT CACCGGTCTC
GGCGATGTCC TCGTGTCTCT CGTCAAAGCC ACGCTGTTCG GTTTCGTGGC GGGTCTGATC
GCCTGCTACC AAGGCTTGCG AGTGCAAAAA GGTGCGGCCG GAGTGGGTAA CGCGGTCAGC
GAAACCGTTG TCATTGCGTT CTTGTTGCTC TTCGTCGTCA ATGCCATCGT CACTGCGGTC
GGGTTCGAGG TCACGAAATG A
 
Protein sequence
MKGFSLRKNL PTAADVKALK PLSIIGGLYA MTLDMFVAMF KPPFQWREFL LQTWFVARVS 
MVPALTLSIP LVVLTSFTFN TLLGEFGAAD FSGTGAALGA VNQIGPFVTV LVVAGAGASA
MCADLGSRTI REEVDAMRVL GLDPIHSLVV PRVLATTLVA VLLSSVVTVT GLLGAFLFSV
YFQHVTPGSF VASMTLITGL GDVLVSLVKA TLFGFVAGLI ACYQGLRVQK GAAGVGNAVS
ETVVIAFLLL FVVNAIVTAV GFEVTK