Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1349 |
Symbol | |
ID | 4110186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1459813 |
End bp | 1461576 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638030470 |
Product | lipoprotein LpqB |
Protein accession | YP_638517 |
Protein GI | 108798320 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.255019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGCC TGTGGGCGGT GGTGTGGCTG CTGGTGTTCG CGGTCGCGGC ATCGGGGTGT GCGGGAGTGC CGAATTCCTC GGCCCCGCAG GCGATCGGAA CCGTCGAGCG GCCCGCACCG CCGAGCCTGC CCAAACCGAC ACCCGGCATG GATCCGGACG TGCTGCTGCG CGAATTCCTC AAGGCCACCG CGGATCCGGC GAACCGGCAC CTCGCGGCGC GTCAGTTCCT CACCGAGTCG GCGTCGCAAT CCTGGGACGA TGCGGGCAGC GCCCTGCTGA TCGACCGGGT GGTGTTCGTC GAAACCCGTG AGCCCGAGCG GGTCTCGGTG ACCATGCGCG CCGACATCCT CGGTTCGCTC TCGGATATGG GCGTCTTCGA AACCGGTGAG GGCGCGTTAC CGGATCCCGG CCCGATCGAA CTGGTGAAGA CCACCGACGG ATGGCGCATC GACCGGCTGC CCAACGGTGT CTTCCTCGAC TGGCAGCAAT TCCAGTCCAC CTACAAACGC AACACGCTCT ACTTCGTCGA CCCGACCGGC ACCACCGTCG TCCCCGACCC GCGCTACGTC GCGGTGTCGG ACTCCGACCA GTTGGCCACC GAGCTGGTGT CCAAGCTGAT CGCCGGGCCG CGACCAGAGA TGGCCAACAC GGTGCGCAAC CTGCTCGGGG CGCCGCTGAC CCTGCGCGGA CCGGTGACCC GCGCGGACGG CGGCAAGACG GGCGTGGGGC GCGGGTACGG AGGCGCGCGC ATCGATCTGG AGAACCTCTC GACGACCGAT CCGCACAGCA GGCAACTGCT GGCCGCGCAG ATCATCTGGA CCCTCAACCG GGCCGGCATC AACGGGCCCT ACGTGATCAA CGCCGACGGC GCCCCGCTCG ACGACCGGTT CACCGACGGG TGGGAGTCCT CCGACGTGGC CGCCACCGAT CCGGGTGCGT TCGCAGGTGC CGCCGCCGGT CTGCACGCGC TGATGAACGG CTCGCTGGTG TCGCTGGACG GCCAGCGGGC CCCGCGGGTG GCGGGATCGT TCGGTCAGGC GCCCAACCAG GCGTCCGCGG CGATATCGCG CAGCGGTCAG GACGCCGCCT CGGTGGTGGT GCTGCGGCCC GGTGCGCCCG ATATGCAGTC GACCCTGTGG ATCGGCCCGC TGGGAGGACG CGCGGCGCAG GCGTTGGAGG GCAAGAGCCT GTCACGGCCC AGTTGGTCCC TCGACGACGC GGTGTGGGTG GTGGTCGACG GCGCCAACGT CGTGCGGGTG ATCCAGGACG CATCGGGTGC CCCGGCGCGG ATTCCGGTCG ACGCCGGGCC GGTGGCGCTG GAGTTCCCCG GCCCCATCGC CGAACTGCAG CTGTCCCGCG ACGGCACGCG GGCGGCGATG GTGATCGGCG GGCAGGTCAT CCTCGCCTCG GTGGAGCAGA CCGAGGGCGG GCAGTACGCC CTGACGTATC CGCGGCGCCT CGGCTTCGGG CTGGGCGAGA CGGTGGTGTC CCTGGCGTGG CGCACCGGCG ACGACATCGT GGTCAGCCGC AAGGACCCTC AGCATCCGGT GTCCTATGTC AACCTCGACG GCGTGAACTC CGACGGGCCG AGCCGCAACC TCGCGATGCC GGTGACCACG GTGGCGGCCA ACCCGTCGAC GGTGTACGTC GCCGACGCGC GCGGGGTGGT CCAGCTGTCG CCGTCGACCG CCGAGGGCGA CCCCACCTGG ACCGAGGTGC GTCCGCTGAT GGTCGCAGGC ACGATCCCCG TGCTGCCGGG CTGA
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Protein sequence | MSRLWAVVWL LVFAVAASGC AGVPNSSAPQ AIGTVERPAP PSLPKPTPGM DPDVLLREFL KATADPANRH LAARQFLTES ASQSWDDAGS ALLIDRVVFV ETREPERVSV TMRADILGSL SDMGVFETGE GALPDPGPIE LVKTTDGWRI DRLPNGVFLD WQQFQSTYKR NTLYFVDPTG TTVVPDPRYV AVSDSDQLAT ELVSKLIAGP RPEMANTVRN LLGAPLTLRG PVTRADGGKT GVGRGYGGAR IDLENLSTTD PHSRQLLAAQ IIWTLNRAGI NGPYVINADG APLDDRFTDG WESSDVAATD PGAFAGAAAG LHALMNGSLV SLDGQRAPRV AGSFGQAPNQ ASAAISRSGQ DAASVVVLRP GAPDMQSTLW IGPLGGRAAQ ALEGKSLSRP SWSLDDAVWV VVDGANVVRV IQDASGAPAR IPVDAGPVAL EFPGPIAELQ LSRDGTRAAM VIGGQVILAS VEQTEGGQYA LTYPRRLGFG LGETVVSLAW RTGDDIVVSR KDPQHPVSYV NLDGVNSDGP SRNLAMPVTT VAANPSTVYV ADARGVVQLS PSTAEGDPTW TEVRPLMVAG TIPVLPG
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