Gene Mmcs_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1231 
Symbol 
ID4110068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp1329607 
End bp1330083 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID638030352 
Productcytidine deaminase 
Protein accessionYP_638399 
Protein GI108798202 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.216386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGGTC ATCCGGGGCG GTCTTCGGAA TCCATTCAGA GGCGGGGTGA AAGAGCGCAA 
ATGTCTCCCG AAATCAAGTG GGAAGTGTTG CGGCGCAAGG CAATTGAGGC ATCTACGCTG 
GCGTATGCGC CCTACTCGGG GTTTCCGGTG GGCGCGGCGG CGCTCGTCGA CGATGACCGA 
ATCGTGACCG GATGCAATGT GGAGAATGTC TCATATGGCC TGGGTCTCTG TGCCGAGTGC 
AGTGTGGTCT GCGCCCTGCA TTCCGGCGGC GGCGGACGCC TGGTCGCGCT GTCGTGTGTG 
GGGCCCGATT CCGAGGTGCT GATGCCCTGT GGCCGGTGCC GTCAGGTGCT GCTCGAACAC 
GGCGGTCCCG ATCTGCTGAT CGACCATCCG CACGGTCCGC GGCCGCTCGG GGAACTCCTG 
CCCGACGCGT TCGGACCCGA CGATCTGGCG CGGCGGGCGG CGGGGGAGAA GCCGTGA
 
Protein sequence
MRGHPGRSSE SIQRRGERAQ MSPEIKWEVL RRKAIEASTL AYAPYSGFPV GAAALVDDDR 
IVTGCNVENV SYGLGLCAEC SVVCALHSGG GGRLVALSCV GPDSEVLMPC GRCRQVLLEH 
GGPDLLIDHP HGPRPLGELL PDAFGPDDLA RRAAGEKP