| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1220 |
|---|
| Symbol | |
|---|
| ID | 4110057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1319422 |
|---|
| End bp | 1320993 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638030341 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | YP_638388 |
|---|
| Protein GI | 108798191 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTATG CGCAGCAGGG GGGATGTGGG TCCGATAGCG TTGGACCCAT GACAGCGCTT
GCGTCGAACG CCTCGGCGTC CAACTCAGTG GCCAGCAGCT GGATCGATGG TGCGCCGGTG
CAGACCGGCG GCGGTTCGTT CCAGATCGTC AACCCCGCGA CCGGTGCGGT CGTCACAGAA
TATGCCCGCG CGGCGAACGT CGACGTGGAT GTGGCCGTCG CCGCGGCCCG GGCGGCCCTG
CCCGGATGGG CGACCGCGAC CCCGGCCGAA CGTTCGGCGG TGCTGGCCAA GCTGGCGAAG
CTGGCCGACG AGCACACCGA CGTGCTGGTC GCCGAGGAGG TCAGCCAGAC CGGGAAGCCG
GTGCGGCTGG CCCGCGAGTT CGACGTGCCC GGCAGCGTCG ACAACATCGA CTTCTTCGCA
GGCGCGGCCC GGCACCTGGA GGGCAAGGCG ACCGCCGAGT ACTCCGGTGA TCACACCTCG
AGCATCCGGC GGGAGGCGAT CGGCGTCGTC GCGACCATCA CCCCCTGGAA CTATCCGCTT
CAGATGGCGG TGTGGAAGGT GCTGCCCGCG CTGGCCGCCG GCTGCACCGT GGTGATCAAG
CCCTGCGAGC TGACGCCGCT GACCACGCTG ACGTTGGCGC GGCTGGCCGG TGAGGCGGGG
CTGCCGCCAG GTGTGCTCAA CGTGGTCACC GGTTTCGGCG CCGACGTGGG CACCGCACTG
GCGGGGCACC CCGGGGTCGA TCTGGTGACG TTCACCGGGT CGACGGTCGT GGGCCGCAAG
GTGATGTCGG CGGCCGCGGT GCACGGGCAC CGCACGCAAC TCGAACTCGG CGGCAAGGCC
CCGTTCGTGG TGTTCGACGA CGCGGACCTC GACGCCGCGA TCCAGGGAGC GGTCGCCGGT
TCGCTGATCA ACTCCGGCCA GGACTGCACG GCCGCGACGC GCGCGATCGT GGCCCGTGAT
CTCTACGACG ACTTCGTGGC CGGCGTCGCC GAGGTGATGG GCAAGATCGT CGTCGGCGAT
CCGGAGGATC CCGACACCGA CCTCGGTCCG CTGATCTCGA CGGCCCACCG CGACAAGGTG
GCGGGCATGG TGTCGCGGGC ACCGGCCGAG GGCGGTCGCG TCGTGACCGG CGGGACGATC
CCCGATCTGC CGGGTTCGTT CTACCGCCCG ACCCTGATCG CCGACGTCGG CGAGCAGTCC
GAGGTGTACC GCGAAGAGAT CTTCGGTCCG GTGCTCACGG TGCGCTCGTT CACCGACGAC
GACGATGCGC TGCGCCAGGC CAACGACACC GATTACGGGT TGGCGGCCTC TGCGTGGACG
CGTGACGTCT ATCGCGCGCA GCGGGCGTCC CGTGAGATCA ACGCCGGTTG CGTGTGGATC
AACGACCACA TCCCGATCAT CAGCGAGATG CCGCACGGCG GCGTGGGCGC ATCAGGCTTC
GGCAAGGACA TGAGCGACTA CTCGTTCGAG GAGTACCTCA CGATCAAGCA CGTGATGAGC
GACATCACCG GGGTGGCCGA CAAGGAGTGG CACCGGACGG TGTTCAAGAA GCGAAGCGGA
TTGAACCATT AG
|
|---|
| Protein sequence | MRYAQQGGCG SDSVGPMTAL ASNASASNSV ASSWIDGAPV QTGGGSFQIV NPATGAVVTE
YARAANVDVD VAVAAARAAL PGWATATPAE RSAVLAKLAK LADEHTDVLV AEEVSQTGKP
VRLAREFDVP GSVDNIDFFA GAARHLEGKA TAEYSGDHTS SIRREAIGVV ATITPWNYPL
QMAVWKVLPA LAAGCTVVIK PCELTPLTTL TLARLAGEAG LPPGVLNVVT GFGADVGTAL
AGHPGVDLVT FTGSTVVGRK VMSAAAVHGH RTQLELGGKA PFVVFDDADL DAAIQGAVAG
SLINSGQDCT AATRAIVARD LYDDFVAGVA EVMGKIVVGD PEDPDTDLGP LISTAHRDKV
AGMVSRAPAE GGRVVTGGTI PDLPGSFYRP TLIADVGEQS EVYREEIFGP VLTVRSFTDD
DDALRQANDT DYGLAASAWT RDVYRAQRAS REINAGCVWI NDHIPIISEM PHGGVGASGF
GKDMSDYSFE EYLTIKHVMS DITGVADKEW HRTVFKKRSG LNH
|
|---|
| |